| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) CATTTAAAAA (3)
| 48.9 | 0.0489 |
| Cb medulloblastoma | CAAAAAAAAA (2) CACAACAAAA (3)
| 104.1 | 0.1041 |
| P8 GC+1d culture | CAAAAAAAAA (2) CACAACAAAA (3) CATTTAAAAA (3) GGATTCTATT (3)
| 41 | 0.041 |
| P8 GC+SHH+1d culture | CAAAAAAAAA (2) CAAACAAAAA GGATTCTATT (3) GGGCACTACT
| 62.1 | 0.0621 |
| 3T3 fibroblasts | GGGCACTACT
| 3.5 | 0.0035 |
| E15 cortex | CAAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | CAAAAAAAAA (2)
| 22.7 | 0.0227 |
| Hypothalamus | CAAAAAAAAA (2) CAAACAAAAA CACAACAAAA (3) CATTTAAAAA (3)
| 50.6 | 0.0506 |
| E12.5 retina | CAAAAAAAAA (2) CAAACAAAAA CAATAAAAAA (4) GATTTCTACT (4)
| 43.2 | 0.0432 |
| E14.5 retina | CAAAAAAAAA (2) CAAACAAAAA CAATAAAAAA (4)
| 12.7 | 0.0127 |
| E16.5 retina | CAAAAAAAAA (2) GATTTCTACT (4)
| 10.9 | 0.0109 |
| E18.5 retina | AATGCCAGGT CAAAAAAAAA (2) CAAACAAAAA
| 47.2 | 0.0472 |
| P0.5 retina | AATGCCAGGT CAAAAAAAAA (2) CAATAAAAAA (4) GATTTCTACT (4) GGATTCTATT (3)
| 241.3 | 0.2413 |
| P2.5 retina | CAAAAAAAAA (2) CAAACAAAAA CATTTAAAAA (3)
| 56.4 | 0.0564 |
| P4.5 retina | CAAAAAAAAA (2) CATTTAAAAA (3)
| 43.6 | 0.0436 |
| P6.5 retina | CAAAAAAAAA (2) CAAACAAAAA CACAACAAAA (3)
| 35.1 | 0.0351 |
| P10.5 crx- retina | CAAAAAAAAA (2) CAAACAAAAA GATTTCTACT (4)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | CAAAAAAAAA (2) CAAACAAAAA CAATAAAAAA (4) GATTTCTACT (4)
| 44.2 | 0.0442 |
| Adult retinal | CAAAAAAAAA (2) CAAACAAAAA CAATAAAAAA (4) CACAACAAAA (3) GGATTCTATT (3) GGGCACTACT
| 31.7 | 0.0317 |
| ONL | CAAAAAAAAA (2) CATTTAAAAA (3)
| 19.1 | 0.0191 |