| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAATTGA (6) AAGGAGATGG CACAAATATT (2)
| 18 | 0.018 |
| Cb medulloblastoma | CACAAATATT (2) GCCCCCAGTT
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAGGAGATGG CACAAATATT (2) GGAGGGAGTT TCTTTAATCC (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | AAAAAATTGA (6) AAGGAGATGG CACAAATATT (2) CAGCCAAATT (2) GCACCCCAGT (2) TCTTTAATCC (2)
| 25.7 | 0.0257 |
| 3T3 fibroblasts | TCTTTAATCC (2)
| 7 | 0.007 |
| E15 cortex | AAAAAATTGA (6) CAGCCAAATT (2) GCCCCCAGTT TCTTTAATCC (2)
| 29.6 | 0.0296 |
| P1 cortex | AAAAAATTGA (6) GTGGGAAGAG (2) TCTTTAATCC (2)
| 36.3 | 0.0363 |
| Hypothalamus | AAAAAATTGA (6) CAGCCAAATT (2) GCACCCCAGT (2) GCTGCCATCA (2)
| 7.2 | 0.0072 |
| E12.5 retina | CACAAATATT (2) GTGGCACAGA (2)
| 5.7 | 0.0057 |
| E14.5 retina | CACAAATATT (2) GTGGCACAGA (2) GTGGGAAGAG (2) TCTTTAATCC (2)
| 31 | 0.031 |
| E16.5 retina | CACAAATATT (2) GCCCCCAGTT TCTTTAATCC (2)
| 23.6 | 0.0236 |
| E18.5 retina | AAAAAATTGA (6) AAGGAGATGG CACAAATATT (2) TCTTTAATCC (2)
| 12.7 | 0.0127 |
| P0.5 retina | AAAAAATTGA (6) TCTTTAATCC (2)
| 5.9 | 0.0059 |
| P2.5 retina | AAAAAATTGA (6) CACAAATATT (2) CAGCCAAATT (2) GCCCCCAGTT GTGGCACAGA (2) GTGGGAAGAG (2) TCTTTAATCC (2)
| 16.1 | 0.0161 |
| P4.5 retina | AAAAAATTGA (6) CACAAATATT (2) TCTTTAATCC (2)
| 13.9 | 0.0139 |
| P6.5 retina | AAAAAATTGA (6) CACAAATATT (2) GTGGCACAGA (2) GTGGGAAGAG (2)
| 10.1 | 0.0101 |
| P10.5 crx- retina | AAAAAATTGA (6) AAGGAGATGG CACAAATATT (2) CAGCCAAATT (2) GCTGCCATCA (2) TCTTTAATCC (2)
| 20.5 | 0.0205 |
| P10.5 crx+ retina | CAGCCAAATT (2) GCACCCAGCT GTGGCACAGA (2) TCTTTAATCC (2)
| 11.4 | 0.0114 |
| Adult retinal | CAGCCAAATT (2) GCCCCCAGTT GCTGCCATCA (2) GTGGCACAGA (2) TCTTTAATCC (2)
| 15 | 0.015 |
| ONL | CAGCCAAATT (2) GGAGGGAGTT TCTTTAATCC (2)
| 19.1 | 0.0191 |