Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259021	Fxr1h	fragile X mental retardation gene 1, autosomal homolog	3		14359
Gene Ontology	costamere | muscle development | nucleic acid binding | RNA binding
Human Homolog	FXR1[fragile X mental retardation, autosomal homolog 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGACCACA CACGGGACCA GGGAATGGCA (2) GTCCTTCAGA (2) TGGATGGTGG (2) TTTAGTCTTC 42.3 0.0423 Cb medulloblastoma AACACAAAAA AAGAATTTGT CACGGGACCA GAAAATAAAC (3) 64.7 0.0647 P8 GC+1d culture AACACAAAAA CACGGGACCA GAAAATAAAC (3) TAAGAAATTG TTTAGTCTTC 37.7 0.0377 P8 GC+SHH+1d culture AGCTTTTAAA (4) CACACAAAAT CACGGGACCA CAGAAATCTT CATACATACA GAAAATAAAC (3) GTCCTTCAGA (2) TTTAGTCTTC 40 0.04 3T3 fibroblasts CACGGGACCA TGGATGGTGG (2) TGTGTATACA (2) TGTGTTTTTA (2) TTTAGTCTTC 45.5 0.0455 E15 cortex CACGGGACCA GAAAATAAAC (3) GGGAATGGCA (2) GTCCTTCAGA (2) TGGATGGTGG (2) 59.2 0.0592 P1 cortex AAGAATTTGT CACGGGACCA TGGATGGTGG (2) TTTAGTCTTC 36.3 0.0363 Hypothalamus AAGAATTTGT CACACAAAAT CACGGGACCA CAGAAATCTT GAAAATAAAC (3) TGTGTTTTTA (2) 101.4 0.1014 E12.5 retina AGCTTTTAAA (4) CACGGGACCA GAAAATAAAC (3) GTCCTTCAGA (2) TGTGTTTTTA (2) TTTAGTCTTC 30.1 0.0301 E14.5 retina CACGGGACCA CAGAAATCTT CATACATACA GAAAATAAAC (3) GTCCTTCAGA (2) TGTGTTTTTA (2) TTTAGTCTTC 25.4 0.0254 E16.5 retina CACGGGACCA GAAAATAAAC (3) TGTGTTTTTA (2) TTTAGTCTTC 28.9 0.0289 E18.5 retina AACACAAAAA ACTGACCACA CACGGGACCA CATACATACA GAAAATAAAC (3) TGTGTATACA (2) TTTAGTCTTC 41.8 0.0418 P0.5 retina AGCTTTTAAA (4) CACGGGACCA GAAAATAAAC (3) GCAGGTAACA TAAGAAATTG 37.4 0.0374 P2.5 retina AGCTTTTAAA (4) CACGGGACCA CATACATACA GAAAATAAAC (3) TTTAGTCTTC 24.7 0.0247 P4.5 retina AACACAAAAA ACTGACCACA CACGGGACCA CATACATACA GAAAATAAAC (3) TGTGTTTTTA (2) TTTAGTCTTC 45.8 0.0458 P6.5 retina CACGGGACCA GAAAATAAAC (3) TGGATGGTGG (2) TGTGTTTTTA (2) 43.4 0.0434 P10.5 crx- retina CACGGGACCA CAGAAATCTT GAAAATAAAC (3) GCAGGTAACA GTCCTTCAGA (2) TGTGTTTTTA (2) 42.9 0.0429 P10.5 crx+ retina ACTGACCACA CACGGGACCA GAAAATAAAC (3) TGGATGGTGG (2) 36.4 0.0364 Adult retinal ACTGACCACA AGCTTTTAAA (4) CACACAAAAT CACGGGACCA CAGAAATCTT CATACATACA GCAGGTAACA TGTGTATACA (2) TGTGTTTTTA (2) TTTAGTCTTC 44.8 0.0448 ONL AACACAAAAA CACGGGACCA CATACATACA GAAAATAAAC (3) GGGAATGGCA (2) TGTGTTTTTA (2) TTTAGTCTTC 26.7 0.0267