| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) TGCAGAGAAA (2) TGCAGGCTAA (3)
| 94.6 | 0.0946 |
| Cb medulloblastoma | GAAAAAAAAA (2) GCAAAAAAAA (2) TGCAGAGAAA (2) TTATTTTTAG (2)
| 242.7 | 0.2427 |
| P8 GC+1d culture | GAAAAAAAAA (2) GCAAAAAAAA (2) TGCAGAGAAA (2) TGCAGGCTAA (3) TTATTTTTAG (2)
| 73.1 | 0.0731 |
| P8 GC+SHH+1d culture | GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) GCAAGGGAAA (5) GCTCTTGGGT (5) TGCAGAGAAA (2) TGTGGTGTAA TTATTTTTAG (2)
| 134.7 | 0.1347 |
| 3T3 fibroblasts | GAGGAGGAGG (2) GCAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | CTCTGAGAAG GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) TGCAGAGAAA (2)
| 79 | 0.079 |
| P1 cortex | CTCTGAGAAG GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) GCAAGGGAAA (5) TTATTTTTAG (2)
| 77.2 | 0.0772 |
| Hypothalamus | CAAAGGGAAA (2) GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) TAGAGTGTCC (3) TGCAGAGAAA (2) TGTGGTGTAA
| 124.9 | 0.1249 |
| E12.5 retina | CTCTGAGAAG GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) GCAAGGGAAA (5) GTGAGCTTGC (3) TGCAGAGAAA (2) TTATTTTTAG (2)
| 78.9 | 0.0789 |
| E14.5 retina | CTGACAACCT (3) GAAAAAAAAA (2) GCAAAAAAAA (2) TGCAGAGAAA (2) TGCAGGCTAA (3)
| 60.1 | 0.0601 |
| E16.5 retina | GAAAAAAAAA (2) GCAAAAAAAA (2) GCTCTTGGGT (5) TAGAGTGTCC (3) TGCAGAGAAA (2) TGTGGTGTAA
| 47 | 0.047 |
| E18.5 retina | CAAAGGGAAA (2) GAAAAAAAAA (2) GCAAAAAAAA (2) GCAAGGGAAA (5) TGCAGAGAAA (2)
| 111 | 0.111 |
| P0.5 retina | GAAAAAAAAA (2) GCAAAAAAAA (2) TAGAGTGTCC (3) TGCAGAGAAA (2) TTATTTTTAG (2)
| 59 | 0.059 |
| P2.5 retina | CTGACAACCT (3) GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) GCAAGGGAAA (5) TGCAGAGAAA (2) TGCAGGCTAA (3)
| 123.3 | 0.1233 |
| P4.5 retina | GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) GCAAGGGAAA (5) TGCAGAGAAA (2) TGCAGGCTAA (3)
| 93.2 | 0.0932 |
| P6.5 retina | CTCTGAGAAG CTGACAACCT (3) GAAAAAAAAA (2) GCAAAAAAAA (2) TGCAGAGAAA (2) TTATTTTTAG (2)
| 66.8 | 0.0668 |
| P10.5 crx- retina | CAAAGGGAAA (2) GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2)
| 26.1 | 0.0261 |
| P10.5 crx+ retina | CTCTGAGAAG GAAAAAAAAA (2) GCAAAAAAAA (2) TGCAGAGAAA (2)
| 57.7 | 0.0577 |
| Adult retinal | GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) TAGAGTGTCC (3) TGCAGAGAAA (2) TGCAGGCTAA (3) TTATTTTTAG (2)
| 42.8 | 0.0428 |
| ONL | CTCTGAGAAG CTGACAACCT (3) GAAAAAAAAA (2) GAGGAGGAGG (2) GCAAAAAAAA (2) TAGAGTGTCC (3) TGCAGAGAAA (2) TGCAGGCTAA (3)
| 45.9 | 0.0459 |