| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTGGAAATAG (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 9.7 | 0.0097 |
| Cb medulloblastoma | AAAAGCCTTT GATAAAAAAA GTCAAATATA (3) TTGGAAATAG (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 41.6 | 0.0416 |
| P8 GC+1d culture | AAAAGCCTTT GATAAAAAAA TTTGTGTTTT (3) TTTTAGAACT (6)
| 18.3 | 0.0183 |
| P8 GC+SHH+1d culture | AAAAGCCTTT GATAAAAAAA TTTGTGTTTT (3) TTTTAGAACT (6)
| 35.1 | 0.0351 |
| 3T3 fibroblasts | TTTGTGTTTT (3)
| 3.5 | 0.0035 |
| P1 cortex | AAAAGCCTTT TTTGTGTTTT (3)
| 13.6 | 0.0136 |
| Hypothalamus | GATAAAAAAA TTGGAAATAG (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 16.2 | 0.0162 |
| E12.5 retina | AAAAGCCTTT GATAAAAAAA TTTGTGTTTT (3)
| 18.9 | 0.0189 |
| E14.5 retina | GATAAAAAAA TTGGAAATAG (3) TTTGTGTTTT (3)
| 23.6 | 0.0236 |
| E16.5 retina | TTTGTGTTTT (3) TTTTAGAACT (6)
| 19.9 | 0.0199 |
| E18.5 retina | AAAAGCCTTT GATAAAAAAA TTGGAAATAG (3) TTTGTGTTTT (3)
| 47.2 | 0.0472 |
| P0.5 retina | GATAAAAAAA TTTGTGTTTT (3) TTTTAGAACT (6)
| 23.6 | 0.0236 |
| P2.5 retina | AAAAGCCTTT GATAAAAAAA GTCAAATATA (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 23 | 0.023 |
| P4.5 retina | GATAAAAAAA GTCAAATATA (3) TTGGAAATAG (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 43.7 | 0.0437 |
| P6.5 retina | AAAAGCCTTT GATAAAAAAA TTGGAAATAG (3) TTTGTGTTTT (3) TTTTAGAACT (6)
| 15 | 0.015 |
| P10.5 crx- retina | TTTGTGTTTT (3)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | GATAAAAAAA TTTGTGTTTT (3) TTTTAGAACT (6)
| 26.9 | 0.0269 |
| ONL | GATAAAAAAA GTCAAATATA (3) TTGGAAATAG (3) TTTGTGTTTT (3)
| 15.3 | 0.0153 |