Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259197	D030069N10Rik	RIKEN cDNA D030069N10 gene	9		320177
Mm.259197	Rbm5	RNA binding motif protein 5	9		83486
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	RBM5[RNA binding motif protein 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATGGAAC (3) AGTTTGAGGC (3) CTCCGGTGGC GAACGCTGGG (3) TCTTTGGCAA 16.3 0.0163 Cb medulloblastoma ACAGCCCTAT (2) TAAAACTCAT (2) TCTTTGGCAA TTGTAGCCTG (2) 9.2 0.0092 P8 GC+1d culture ATCACATTTG (4) CAGCAGGCCA TCTTTGGCAA TGTGTGCAGT (2) TTGTAGCCTG (2) 9 0.009 P8 GC+SHH+1d culture GAACGCTGGG (3) GGCAACCTCC (2) TTGTAGCCTG (2) 7.1 0.0071 3T3 fibroblasts AGTTTGAGGC (3) CGCGCTGTGA (3) CTCCGGTGGC GAACGCTGGG (3) GTGTCCTTAG (2) TCTTTGGCAA TGTGTGCAGT (2) 45.5 0.0455 E15 cortex ACAGCCCTAT (2) AGTTTGAGGC (3) CTCCGGTGGC GAACGCTGGG (3) GGCAACCTCC (2) TTGTAGCCTG (2) 49.3 0.0493 P1 cortex AAAATGGAAC (3) 4.5 0.0045 Hypothalamus TCTTTGGCAA TTGTAGCCTG (2) 3.6 0.0036 E12.5 retina CACCAGGCTG (2) CTCCGGTGGC TTGTAGCCTG (2) 9.4 0.0094 E14.5 retina AGTTTGAGGC (3) CACCAGGCTG (2) CCTTGTGCTA (3) TCTTTGGCAA TTGTAGCCTG (2) 10.8 0.0108 E16.5 retina TTGTAGCCTG (2) 5.4 0.0054 E18.5 retina GATTAAAAAA (2) TTGTAGCCTG (2) 9.1 0.0091 P0.5 retina AAAATGGAAC (3) ATCACATTTG (4) TTGTAGCCTG (2) 7.9 0.0079 P2.5 retina CACCAGGCTG (2) GATTAAAAAA (2) TAAAACTCAT (2) TTGTAGCCTG (2) 14.2 0.0142 P4.5 retina AAAATGGAAC (3) ACAGCCCTAT (2) CCTTGTGCTA (3) GATTAAAAAA (2) TAAAACTCAT (2) TTGTAGCCTG (2) 17.9 0.0179 P6.5 retina ATCACATTTG (4) CCTTGTGCTA (3) TCTTTGGCAA TGTGTGCAGT (2) TTGTAGCCTG (2) 15.1 0.0151 P10.5 crx- retina CCTTGTGCTA (3) GGCAACCTCC (2) GTGTCCTTAG (2) TTGTAGCCTG (2) 13.1 0.0131 P10.5 crx+ retina AAAATGGAAC (3) AGTTTGAGGC (3) CTCCGGTGGC TTGTAGCCTG (2) 11.5 0.0115 Adult retinal AGTTTGAGGC (3) CACCAGGCTG (2) CAGCAGGCCA CTCCGGTGGC TTGTAGCCTG (2) 15 0.015 ONL TTGTAGCCTG (2) 1.9 0.0019