| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 40.8 | 0.0408 |
| Cb medulloblastoma | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 111 | 0.111 |
| P8 GC+1d culture | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 51.4 | 0.0514 |
| P8 GC+SHH+1d culture | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 44.5 | 0.0445 |
| 3T3 fibroblasts | CTCCCACCTT (3)
| 10.5 | 0.0105 |
| E15 cortex | CTCCCACCTT (3)
| 9.9 | 0.0099 |
| P1 cortex | CAGTTATAAA (5)
| 9.1 | 0.0091 |
| Hypothalamus | CAGTTATAAA (5) CTCCCACCTT (3)
| 52.6 | 0.0526 |
| E12.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 18.8 | 0.0188 |
| E14.5 retina | CTCCCACCTT (3)
| 12.8 | 0.0128 |
| E16.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 12.7 | 0.0127 |
| E18.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 34.7 | 0.0347 |
| P0.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 17.7 | 0.0177 |
| P2.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 29.9 | 0.0299 |
| P4.5 retina | CAGTTATAAA (5) CTCCCACCTT (3)
| 47.5 | 0.0475 |
| P6.5 retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 41.7 | 0.0417 |
| P10.5 crx- retina | AATAAAAGTG CAGTTATAAA (5) CTCCCACCTT (3)
| 26 | 0.026 |
| P10.5 crx+ retina | CAGTTATAAA (5) CTCCCACCTT (3)
| 32.6 | 0.0326 |
| Adult retinal | CAGTTATAAA (5) CTCCCACCTT (3)
| 46.3 | 0.0463 |
| ONL | CAGTTATAAA (5) CTCCCACCTT (3)
| 23 | 0.023 |