Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259308	Mbd4	methyl-CpG binding domain protein 4	6	6 50.3 cM	17193
Gene Ontology	base-excision repair | chromatin | DNA binding | DNA damage response, signal transduction resulting in induction of apoptosis | DNA methylation | DNA repair | hydrolase activity | N-methyltransferase activity | nucleus | response to DNA damage stimulus | response to radiation
Human Homolog	MBD4[methyl-CpG binding domain protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCACCACT 4.9 0.0049 Cb medulloblastoma CGCCACCACT TGGCATATAT 6.9 0.0069 P8 GC+1d culture TGGCATATAT 1.1 0.0011 P8 GC+SHH+1d culture CGCCACCACT TGGCATATAT 8.2 0.0082 3T3 fibroblasts CGCCACCACT CGTCGCCTTG 7 0.007 E15 cortex CGCCACCACT 14.8 0.0148 Hypothalamus CGCCACCACT 5.4 0.0054 E12.5 retina CGCCACCACT 3.8 0.0038 E14.5 retina CGCCACCACT 1.8 0.0018 E16.5 retina CGCCACCACT CGTCGCCTTG 7.2 0.0072 E18.5 retina CGCCACCACT TGGCATATAT 5.4 0.0054 P2.5 retina CGCCACCACT 1.8 0.0018 P4.5 retina CGCCACCACT 5.9 0.0059 P6.5 retina CGCCACCACT 3.3 0.0033 P10.5 crx- retina CGCCACCACT 3.7 0.0037 P10.5 crx+ retina CGCCACCACT 1.9 0.0019 Adult retinal CGCCACCACT 7.4 0.0074 ONL CGCCACCACT 5.7 0.0057