| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TCTCCTTTGC TTAAAAAAAA (2)
| 18 | 0.018 |
| Cb medulloblastoma | TTAAAAAAAA (2)
| 53.2 | 0.0532 |
| P8 GC+1d culture | CAATAATTGG TTAAAAAAAA (2) TTACCCATTT
| 30.7 | 0.0307 |
| P8 GC+SHH+1d culture | TTAAAAAAAA (2)
| 34 | 0.034 |
| 3T3 fibroblasts | TTACCCATTT
| 3.5 | 0.0035 |
| E15 cortex | TTAAAAAAAA (2)
| 4.9 | 0.0049 |
| P1 cortex | TCTCCTTTGC TTAAAAAAAA (2)
| 18.1 | 0.0181 |
| Hypothalamus | CTTTTGTTAA TCTCCTTTGC TTAAAAAAAA (2)
| 23.5 | 0.0235 |
| E12.5 retina | CTTTTGTTAA TCTCCTTTGC TTAAAAAAAA (2)
| 15.1 | 0.0151 |
| E14.5 retina | TCTCCTTTGC TTAAAAAAAA (2) TTACCCATTT
| 23.7 | 0.0237 |
| E16.5 retina | TTAAAAAAAA (2)
| 16.3 | 0.0163 |
| E18.5 retina | TCTCCTTTGC TTAAAAAAAA (2)
| 54.5 | 0.0545 |
| P0.5 retina | CTTTTGTTAA GTACCAATTA (2) TTAAAAAAAA (2) TTACCCATTT
| 27.6 | 0.0276 |
| P2.5 retina | CAATAATTGG GTACCAATTA (2) TCTCCTTTGC TTAAAAAAAA (2) TTACCCATTT
| 47.7 | 0.0477 |
| P4.5 retina | TCTCCTTTGC TTAAAAAAAA (2) TTACCCATTT
| 51.6 | 0.0516 |
| P6.5 retina | GTACCAATTA (2) TCTCCTTTGC TTAAAAAAAA (2)
| 20.1 | 0.0201 |
| P10.5 crx- retina | TTAAAAAAAA (2) TTACCCATTT
| 14.9 | 0.0149 |
| P10.5 crx+ retina | TTAAAAAAAA (2) TTACCCATTT
| 13.5 | 0.0135 |
| Adult retinal | TCTCCTTTGC TTAAAAAAAA (2) TTACCCATTT
| 11.2 | 0.0112 |
| ONL | CAATAATTGG TTAAAAAAAA (2)
| 11.5 | 0.0115 |