| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATATGGATG (4) AGTTTGAGGC (3) GTTAAAGGCC TTTGCAACCC (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | AATATGGATG (4) AATTAATTTA (4) CTAACAGCTG (2) CTTCAGAAAA (4) TTTGCAACCC (2)
| 20.7 | 0.0207 |
| P8 GC+1d culture | AATATGGATG (4) GTTAAAGGCC
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | AATATGGATG (4) TTTGCAACCC (2)
| 7.1 | 0.0071 |
| 3T3 fibroblasts | AGTTTGAGGC (3) CTAACAGCTG (2) GTTAAAGGCC
| 14 | 0.014 |
| E15 cortex | AGTTTGAGGC (3) CTTCAGAAAA (4) GAGATGCTGA
| 14.7 | 0.0147 |
| P1 cortex | AATATGGATG (4) AATTAATTTA (4) CTAACAGCTG (2)
| 18.1 | 0.0181 |
| Hypothalamus | AATATGGATG (4) AATTAATTTA (4) GAGATGCTGA TAGGACTTTG (3)
| 21.6 | 0.0216 |
| E12.5 retina | AATATGGATG (4)
| 15 | 0.015 |
| E14.5 retina | AATATGGATG (4) AATTAATTTA (4) AGTTTGAGGC (3)
| 12.7 | 0.0127 |
| E16.5 retina | AATATGGATG (4) TAGGACTTTG (3)
| 10.9 | 0.0109 |
| E18.5 retina | CTAACAGCTG (2)
| 1.8 | 0.0018 |
| P0.5 retina | AATTAATTTA (4) CTTCAGAAAA (4)
| 4 | 0.004 |
| P2.5 retina | AATATGGATG (4) AATTAATTTA (4) CTTCAGAAAA (4) GTTAAAGGCC TGATGGTGAC (2)
| 14.2 | 0.0142 |
| P4.5 retina | AATATGGATG (4)
| 5.9 | 0.0059 |
| P6.5 retina | AATATGGATG (4) TAGGACTTTG (3)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AATATGGATG (4) AATTAATTTA (4) CTAACAGCTG (2) CTTCAGAAAA (4) TTTGCAACCC (2)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | AATATGGATG (4) AATTAATTTA (4) AGTTTGAGGC (3) CTAACAGCTG (2) CTTCAGAAAA (4)
| 13.4 | 0.0134 |
| Adult retinal | AATATGGATG (4) AGTTTGAGGC (3) CTAACAGCTG (2) TAGGACTTTG (3)
| 24.2 | 0.0242 |
| ONL | AATATGGATG (4) AATTAATTTA (4) GAGATGCTGA
| 17.2 | 0.0172 |