| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACAACTGGC AATTCAATTA (4) ATGAGGAGTC (3) GACACGTGGA (2) GCCTCCAAGG (5) GTGCCAACAG (2) TGACTGAGAA (2) TGGGGATAAG (2) TTTAATAATT (2)
| 112.6 | 0.1126 |
| Cb medulloblastoma | AACAACTGGC AAGGAGGGCA (3) AATTCAATTA (4) ACAACTGTCT (3) ATGAGGAGTC (3) GCCTCCAAGG (5) GTGCCAACAG (2)
| 152.5 | 0.1525 |
| P8 GC+1d culture | AATTCAATTA (4) ACAACTGTCT (3) GACACGTGGA (2) GCCTCCAAGG (5) GGCAAAGCTA (2) GTGCCAACAG (2)
| 117.5 | 0.1175 |
| P8 GC+SHH+1d culture | AAACAAACAA (2) AATTCAATTA (4) GCCTCCAAGG (5) GTGCCAACAG (2) GTGCCACACA (2)
| 175.7 | 0.1757 |
| 3T3 fibroblasts | ATGAGGAGTC (3) GCCTCCAAGG (5)
| 455.6 | 0.4556 |
| E15 cortex | ATGAGGAGTC (3) GACACGTGGA (2) GCCTCCAAGG (5)
| 143.4 | 0.1434 |
| P1 cortex | AATTCAATTA (4) GCCTCCAAGG (5) TTTAATAATT (2)
| 136.3 | 0.1363 |
| Hypothalamus | AATTCAATTA (4) AGCCAAGCAC (3) GACACGTGGA (2) GCCTCCAAGG (5) GGCCAAAGGG (2) GTGCCAACAG (2)
| 86.9 | 0.0869 |
| E12.5 retina | AATTCAATTA (4) AGCCAAGCAC (3) GCCTCCAAGG (5) TGGGGATAAG (2)
| 270.3 | 0.2703 |
| E14.5 retina | AACAACTGGC AATTCAATTA (4) GCCTCCAAGG (5) TGGGGATAAG (2) TTTAATAATT (2)
| 72.8 | 0.0728 |
| E16.5 retina | AATTCAATTA (4) GCCTCCAAGG (5) GGCAAAGCTA (2) GGTCCCAAAA (2) GTGCCAACAG (2) GTGCCACACA (2)
| 103.2 | 0.1032 |
| E18.5 retina | AATTCAATTA (4) GCCTCCAAGG (5) TATGGCTTTA (3)
| 138.2 | 0.1382 |
| P0.5 retina | AAACAAACAA (2) AATTCAATTA (4) AGCCAAGCAC (3) GCCTCCAAGG (5)
| 257.1 | 0.2571 |
| P2.5 retina | AAACAAACAA (2) AACAACTGGC AATTCAATTA (4) GACACGTGGA (2) GCCTCCAAGG (5) GGCCAAAGGG (2) TGCCCATCTG (2)
| 200.8 | 0.2008 |
| P4.5 retina | AACAACTGGC AATTCAATTA (4) GCCTCCAAGG (5) GGTCCCAAAA (2) GTGCCAACAG (2) TGACTGAGAA (2) TGCCCATCTG (2) TTTAATAATT (2)
| 119 | 0.119 |
| P6.5 retina | AACAACTGGC AATTCAATTA (4) GCCTCCAAGG (5) GTGCCAACAG (2) TATGGCTTTA (3) TGACTGAGAA (2)
| 178.3 | 0.1783 |
| P10.5 crx- retina | AAGGAGGGCA (3) AATTCAATTA (4) GCCTCCAAGG (5) GTGCCAACAG (2)
| 367.9 | 0.3679 |
| P10.5 crx+ retina | AACAACTGGC AATTCAATTA (4) GCCTCCAAGG (5) GTGCCACACA (2) TATGGCTTTA (3) TGCCCATCTG (2)
| 276.7 | 0.2767 |
| Adult retinal | AACAACTGGC AATTCAATTA (4) GCCTCCAAGG (5) GGCAAAGCTA (2) GTGCCAACAG (2) TGGGGATAAG (2)
| 342.7 | 0.3427 |
| ONL | AAACAAACAA (2) AAGGAGGGCA (3) AATTCAATTA (4) ACAACTGTCT (3) GACACGTGGA (2) GCCTCCAAGG (5) GTGCCACACA (2)
| 373.4 | 0.3734 |