Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260866
5730411O18Rik
RIKEN cDNA 5730411O18 gene
11
279766
Human Homolog
C22orf3[chromosome 22 open reading frame 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTCCCTGGT
4.9
0.0049
Cb medulloblastoma
GACTATTTTT (
3
)
2.3
0.0023
P8 GC+1d culture
GCAAGTGGAG
GCTGCTGCTG (
2
)
GCTGCTGCTT (
2
)
TTTCCCTGGT
14.8
0.0148
P8 GC+SHH+1d culture
GACTATTTTT (
3
)
GCTGCTGCTT (
2
)
TTTCCCTGGT
6.9
0.0069
E15 cortex
GCTGCTGCTT (
2
)
4.9
0.0049
P1 cortex
GCTGCTGCTT (
2
)
4.5
0.0045
Hypothalamus
GCTGCTGCTT (
2
)
5.4
0.0054
E12.5 retina
GCTGCTGCTT (
2
)
TTTCCCTGGT
3.8
0.0038
E14.5 retina
GCAAGTGGAG
1.8
0.0018
E16.5 retina
GCTGCTGCTT (
2
)
TTTCCCTGGT
9
0.009
E18.5 retina
TTTCCCTGGT
7.3
0.0073
P0.5 retina
GACTATTTTT (
3
)
GCTGCTGCTG (
2
)
GCTGCTGCTT (
2
)
TTTCCCTGGT
17.7
0.0177
P2.5 retina
GCTGCTGCTT (
2
)
TTTCCCTGGT
8.8
0.0088
P4.5 retina
TTTCCCTGGT
4
0.004
P6.5 retina
GCAAGTGGAG
GCTGCTGCTG (
2
)
GCTGCTGCTT (
2
)
6.7
0.0067
P10.5 crx- retina
TTTCCCTGGT
1.9
0.0019
P10.5 crx+ retina
GCTGCTGCTT (
2
)
TTTCCCTGGT
13.4
0.0134
Adult retinal
GCTGCTGCTT (
2
)
TTTCCCTGGT
7.5
0.0075
