| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACATCATCT (2) GAAAGAATAC
| 8.1 | 0.0081 |
| Cb medulloblastoma | AAGGACAGTG (2) TACATTGCAC
| 9.2 | 0.0092 |
| P8 GC+1d culture | AACATCATCT (2) AAGGACAGTG (2) AATTTTTTTT (2) GAAAGAATAC TACATTGCAC TAGTTTAGTT
| 19.2 | 0.0192 |
| P8 GC+SHH+1d culture | AACATCATCT (2) AATTTTTTTT (2) GAAAGAATAC TACATTGCAC
| 14 | 0.014 |
| E15 cortex | AACATCATCT (2) AATTTTTTTT (2)
| 9.8 | 0.0098 |
| P1 cortex | AACATCATCT (2) TACATTGCAC
| 13.6 | 0.0136 |
| Hypothalamus | AACATCATCT (2) GATGCAGCCT (2) TACATTGCAC TAGTTTAGTT TATGTGGGTA (2) TCTTCCTCCC
| 19.8 | 0.0198 |
| E12.5 retina | GAAAGAATAC
| 1.9 | 0.0019 |
| E14.5 retina | AACATCATCT (2) GAAAGAATAC GGAATTTTCA (2) TATGTGGGTA (2)
| 12.7 | 0.0127 |
| E16.5 retina | AACATCATCT (2) GAAAGAATAC GATGCAGCCT (2) TACATTGCAC
| 16.3 | 0.0163 |
| E18.5 retina | GAAAGAATAC TACATTGCAC TCTTCCTCCC
| 5.4 | 0.0054 |
| P0.5 retina | AACATCATCT (2)
| 2 | 0.002 |
| P2.5 retina | GGAATTTTCA (2)
| 1.8 | 0.0018 |
| P4.5 retina | AACATCATCT (2) GATGCAGCCT (2) TACATTGCAC
| 9.9 | 0.0099 |
| P6.5 retina | AACATCATCT (2) TACATTGCAC
| 10 | 0.01 |
| P10.5 crx- retina | AACATCATCT (2) TACATTGCAC TATGTGGGTA (2)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | AAGGACAGTG (2) TACATTGCAC
| 13.4 | 0.0134 |
| Adult retinal | TACATTGCAC TCTTCCTCCC
| 14.9 | 0.0149 |
| ONL | TACATTGCAC TCTTCCTCCC
| 3.8 | 0.0038 |