Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260997	Acad9	acyl-Coenzyme A dehydrogenase family, member 9	3		229211
Mm.260997	C630012L17Rik	RIKEN cDNA C630012L17 gene	3		320758
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAATAT (6) ACCGTGAGGG (2) CAGCCACACA (3) TCTGGGTGTG TGGGTTTGGG (2) TTCTGTGTGG 22.8 0.0228 Cb medulloblastoma AAAAAAATAT (6) ACCGTGAGGG (2) CAGCCACACA (3) TTCTGTGTGG 27.7 0.0277 P8 GC+1d culture AAGGCCAAGT ACCGTGAGGG (2) CAGCCACACA (3) TCTGGGTGTG TTCTGTGTGG 13.7 0.0137 P8 GC+SHH+1d culture ACCGTGAGGG (2) CTGGGCTCCT (2) TCTGGGTGTG TTCTGTGTGG 28.1 0.0281 3T3 fibroblasts ACCGTGAGGG (2) CCCAGCTCCC (3) CTGGGCTCCT (2) TCTGGGTGTG TTCTGTGTGG 45.5 0.0455 E15 cortex ACCGTGAGGG (2) 9.9 0.0099 P1 cortex ACCGTGAGGG (2) TCTGGGTGTG TTCTGTGTGG 13.5 0.0135 Hypothalamus AAGGCCAAGT ACCGTGAGGG (2) CAGCCACACA (3) TTCTGTGTGG 7.2 0.0072 E12.5 retina ACCGTGAGGG (2) CCCAGCTCCC (3) CTGGGCTCCT (2) TATAAAGAAA (2) TCTGGGTGTG TTCTGTGTGG 30.1 0.0301 E14.5 retina AAGGCCAAGT ACCGTGAGGG (2) CAGCCACACA (3) TCTGGGTGTG TTCTGTGTGG 27.2 0.0272 E16.5 retina AAGGCCAAGT ACCGTGAGGG (2) CAGCCACACA (3) CCCAGCTCCC (3) CTGGGCTCCT (2) TATAAAGAAA (2) TCTGGGTGTG TTCTGTGTGG 41.5 0.0415 E18.5 retina ACCGTGAGGG (2) TCTGGGTGTG TGGGTTTGGG (2) TTCTGTGTGG 23.6 0.0236 P0.5 retina ACCGTGAGGG (2) CAGCCACACA (3) CCCAGCTCCC (3) CTGGGCTCCT (2) TGGGTTTGGG (2) TTCTGTGTGG 21.7 0.0217 P2.5 retina AAAAAAATAT (6) ACCGTGAGGG (2) ACTGCTGTGC CCCAGCTCCC (3) CTGGGCTCCT (2) TCTGGGTGTG TTCTGTGTGG 60 0.06 P4.5 retina ACCGTGAGGG (2) TCTGGGTGTG TTCTGTGTGG 35.7 0.0357 P6.5 retina AAGGCCAAGT ACCGTGAGGG (2) CCCAGCTCCC (3) TTCTGTGTGG 11.8 0.0118 P10.5 crx- retina ACCGTGAGGG (2) ACTGCTGTGC TTCTGTGTGG 9.3 0.0093 P10.5 crx+ retina AAGGCCAAGT ACCGTGAGGG (2) ACTGCTGTGC CAGCCACACA (3) CCCAGCTCCC (3) TCTGGGTGTG TGGGTTTGGG (2) TTCTGTGTGG 22.9 0.0229 Adult retinal ACCGTGAGGG (2) CTGGGCTCCT (2) 5.6 0.0056 ONL AAAAAAATAT (6) AAGGCCAAGT ACCGTGAGGG (2) CAGCCACACA (3) TATAAAGAAA (2) TGGGTTTGGG (2) 13.3 0.0133