| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAA (2) GCCTTTGGTG (4) GCTGCCACCA (2)
| 48.9 | 0.0489 |
| Cb medulloblastoma | GAAAAAAAAA (2) GCTGCCACCA (2) TGGACAACCT TGTGCATCCT (2)
| 180.3 | 0.1803 |
| P8 GC+1d culture | CTCCTGGCTG (2) GAAAAAAAAA (2)
| 43.4 | 0.0434 |
| P8 GC+SHH+1d culture | CTCCTGGCTG (2) GAAAAAAAAA (2) GCTGCCACCA (2) TTTCTTGGTC
| 80.9 | 0.0809 |
| 3T3 fibroblasts | CTCCTGGCTG (2) GCTGCCACCA (2) TGTGCATCCT (2)
| 52.6 | 0.0526 |
| E15 cortex | GAAAAAAAAA (2) GCTGCCACCA (2)
| 74.2 | 0.0742 |
| P1 cortex | GAAAAAAAAA (2) GCTGCCACCA (2)
| 54.6 | 0.0546 |
| Hypothalamus | GAAAAAAAAA (2)
| 67 | 0.067 |
| E12.5 retina | CTCCTGGCTG (2) GAAAAAAAAA (2) TTTCTTGGTC
| 50.7 | 0.0507 |
| E14.5 retina | CTCCTGGCTG (2) GAAAAAAAAA (2) GCCTTTGGTG (4) TGTGCATCCT (2) TTTCTTGGTC
| 41.8 | 0.0418 |
| E16.5 retina | CTCCTGGCTG (2) GAAAAAAAAA (2) GCTGCCACCA (2)
| 27.1 | 0.0271 |
| E18.5 retina | GAAAAAAAAA (2)
| 65.5 | 0.0655 |
| P0.5 retina | CTCCTGGCTG (2) GAAAAAAAAA (2) GCCTTTGGTG (4)
| 41.2 | 0.0412 |
| P2.5 retina | GAAAAAAAAA (2) GCCTTTGGTG (4) GCTGCCACCA (2) TGGCTTCTTG
| 96.8 | 0.0968 |
| P4.5 retina | GAAAAAAAAA (2) TGGCTTCTTG
| 57.4 | 0.0574 |
| P6.5 retina | GAAAAAAAAA (2) GCCTTTGGTG (4) GCTGCCACCA (2) TGGCTTCTTG
| 46.7 | 0.0467 |
| P10.5 crx- retina | CTCCTGGCTG (2) GAAAAAAAAA (2)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CTCCTGGCTG (2) GAAAAAAAAA (2) TGGCTTCTTG
| 48 | 0.048 |
| Adult retinal | CTCCTGGCTG (2) GAAAAAAAAA (2)
| 18.6 | 0.0186 |
| ONL | CTCCTGGCTG (2) GAAAAAAAAA (2) TGGACAACCT TGGCTTCTTG
| 32.5 | 0.0325 |