| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 65.2 | 0.0652 |
| Cb medulloblastoma | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGCT (2) GGAAACAGTG GGCCCCCTCC
| 55.4 | 0.0554 |
| P8 GC+1d culture | CAGCCAGTGC (2) GACCAGTGGA (2) GCCCACATCC (4) GCCTCACTCA (3) GGAAACAGCT (2) GGAAACAGTG GGCCCCCTCC
| 147.2 | 0.1472 |
| P8 GC+SHH+1d culture | CAGCCAGTGC (2) CCCCTAGCAC (2) GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 97.2 | 0.0972 |
| 3T3 fibroblasts | CCCCTAGCAC (2) GACCAGTGGA (2) GCCCACATCC (4)
| 24.5 | 0.0245 |
| E15 cortex | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 54.4 | 0.0544 |
| P1 cortex | GGAAACAGCT (2) GGAAACAGTG
| 22.7 | 0.0227 |
| Hypothalamus | GACCAGTGGA (2)
| 7.2 | 0.0072 |
| E12.5 retina | AGATCCGCCA (3) CAGCCAGTGC (2) CCCCTAGCAC (2) GACCAGTGGA (2) GCCCACATCC (4)
| 50.8 | 0.0508 |
| E14.5 retina | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGCT (2) GGCCCCCTCC TAGAGGTCGG (3)
| 65.5 | 0.0655 |
| E16.5 retina | AGATCCGCCA (3) CAGCCAGTGC (2) GCCCACATCC (4) GCCTCACTCA (3) TAGAGGTCGG (3)
| 83.3 | 0.0833 |
| E18.5 retina | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG
| 27.2 | 0.0272 |
| P0.5 retina | AGATCCGCCA (3) GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGCT (2) GGAAACAGTG GGCCCCCTCC
| 60.9 | 0.0609 |
| P2.5 retina | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 37 | 0.037 |
| P4.5 retina | GACCAGTGGA (2) GCCCACATCC (4) GCCTCACTCA (3) GGAAACAGTG GGCCCCCTCC
| 45.7 | 0.0457 |
| P6.5 retina | CAGCCAGTGC (2) GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG
| 21.7 | 0.0217 |
| P10.5 crx- retina | CCCCTAGCAC (2) GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 27.9 | 0.0279 |
| P10.5 crx+ retina | CAGCCAGTGC (2) GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 38.4 | 0.0384 |
| Adult retinal | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG GGCCCCCTCC
| 18.6 | 0.0186 |
| ONL | GACCAGTGGA (2) GCCCACATCC (4) GGAAACAGTG
| 15.3 | 0.0153 |