Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261750	B430306D02Rik	RIKEN cDNA B430306D02 gene	X	X 38.0 cM	270627
Gene Ontology	transcription factor TFIID complex
Human Homolog	TAF1[TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGCTCTGGG (2) CCTTTAATCC (3) GAATCTCTCC TAAATGTCCT 70.2 0.0702 Cb medulloblastoma AGCATCAATA ATGCTCTGGG (2) CCTTTAATCC (3) 94.7 0.0947 P8 GC+1d culture CCTTTAATCC (3) GAATCTCTCC TAAATGTCCT TATGATTCAG (2) 45.7 0.0457 P8 GC+SHH+1d culture AGCATCAATA CCTTTAATCC (3) GAATCTCTCC TAAATGTCCT TATGATTCAG (2) 43.3 0.0433 3T3 fibroblasts CCTTTAATCC (3) 70.1 0.0701 E15 cortex CCTTTAATCC (3) TATGATTCAG (2) 59.3 0.0593 P1 cortex CCTTTAATCC (3) 154.5 0.1545 Hypothalamus AGCATCAATA ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 43.4 0.0434 E12.5 retina CCTTTAATCC (3) GAATCTCTCC TAAATGTCCT TATGATTCAG (2) 95.8 0.0958 E14.5 retina ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 127.5 0.1275 E16.5 retina CCTTTAATCC (3) GAATCTCTCC TAAATGTCCT TATGATTCAG (2) 86.9 0.0869 E18.5 retina CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 32.7 0.0327 P0.5 retina ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 90.2 0.0902 P2.5 retina CCTTTAATCC (3) TAAATGTCCT 88 0.088 P4.5 retina CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 49.6 0.0496 P6.5 retina CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 88.3 0.0883 P10.5 crx- retina ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 74.4 0.0744 P10.5 crx+ retina ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT TATGATTCAG (2) 51.8 0.0518 Adult retinal AGCATCAATA ATGCTCTGGG (2) CCTTTAATCC (3) TAAATGTCCT 137.1 0.1371 ONL CCTTTAATCC (3) TAAATGTCCT 97.7 0.0977