Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261786	Arcn1	archain 1	9		213827
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ARCN1[archain 1] | ARCN1[archain 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTGTAAT GGAACAGTGA GGTGCAGGGA (2) TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 78.2 0.0782 Cb medulloblastoma GGAACAGTGA GGTGCAGGGA (2) TAGTAAAGTA TGGTTGCTGG 127.1 0.1271 P8 GC+1d culture ACAGTCGGAG ATACTGTAAT GGTGCAGGGA (2) TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 68.5 0.0685 P8 GC+SHH+1d culture GGTGCAGGGA (2) TGAAAAGGAA TGGTTGCTGG 93.7 0.0937 3T3 fibroblasts TGGTTGCTGG 220.8 0.2208 E15 cortex TGGTTGCTGG 277.1 0.2771 P1 cortex TGGTTGCTGG 86.4 0.0864 Hypothalamus TAGTAAAGTA TGGTTGCTGG 351.4 0.3514 E12.5 retina ATACTGTAAT GGTGCAGGGA (2) TAGTAAAGTA TGGTTGCTGG 169 0.169 E14.5 retina GGTGCAGGGA (2) TGGTTGCTGG 943.8 0.9438 E16.5 retina TGGTTGCTGG 767.9 0.7679 E18.5 retina GGTGCAGGGA (2) TAGTAAAGTA TGGTTGCTGG 258.2 0.2582 P0.5 retina GGTGCAGGGA (2) TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 200.2 0.2002 P2.5 retina ATACTGTAAT GGTGCAGGGA (2) TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 174.3 0.1743 P4.5 retina ATACTGTAAT GGTGCAGGGA (2) TGAAAAGGAA TGGTTGCTGG 156.6 0.1566 P6.5 retina GGTGCAGGGA (2) TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 170 0.17 P10.5 crx- retina ATACTGTAAT TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 293.5 0.2935 P10.5 crx+ retina ATACTGTAAT TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 109.5 0.1095 Adult retinal ATACTGTAAT TAGTAAAGTA TGGTTGCTGG 218.6 0.2186 ONL ACAGTCGGAG ATACTGTAAT TAGTAAAGTA TGAAAAGGAA TGGTTGCTGG 409.8 0.4098