Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261906	Grcc9	gene rich cluster, C9 gene	6	6 60.2 cM	14794
Gene Ontology	intracellular signaling cascade
Human Homolog	GRCC9[likely ortholog of mouse gene rich cluster, C9 gene]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGCCTGGG TAAGGGAAAT (2) 27.7 0.0277 Cb medulloblastoma AGTTTCCAGC GCAGCCTGGG TAAGGGAAAT (2) TAAGGGGAAT TATACCGAAT 113.2 0.1132 P8 GC+1d culture GAGGAGGGGA (2) GCTCTGGGGG TAAGGGAAAT (2) TAAGGGGAAA 65.1 0.0651 P8 GC+SHH+1d culture GAGGAGGGGG (3) GCAGCCTGGG TAAGGGAAAT (2) TAAGGGGAAT 51.6 0.0516 3T3 fibroblasts GCTCTGGGGG GTGGAGGCAG (2) 7 0.007 E15 cortex TAAGGGAAAT (2) TAAGGGGAAA 9.8 0.0098 P1 cortex TAAGGGAAAT (2) 18.2 0.0182 Hypothalamus AGACCCTAAG (2) GAGGAGGGGG (3) GCAGCCTGGG TAAGGGAAAT (2) TATACCGAAT TCAGGGAACA 90.5 0.0905 E12.5 retina GAGGAGGGGA (2) TAAGGGAAAT (2) 73.2 0.0732 E14.5 retina GAGGAGGGGG (3) TAAGGGAAAT (2) TAAGGGGAAT TATACCGAAT 76.4 0.0764 E16.5 retina AGACCCTAAG (2) GCAGCCTGGG GTTGGAGCAC (2) TAAGGGAAAT (2) TATACCGAAT 101.4 0.1014 E18.5 retina GCAGCCTGGG GTTGGAGCAC (2) TAAGGGAAAT (2) TAAGGGGAAT 238.2 0.2382 P0.5 retina AGTTTCCAGC TAAGGGAAAT (2) TAAGGGGAAT 29.5 0.0295 P2.5 retina GAGGAGGGGA (2) GCAGCCTGGG TAAGGGAAAA TAAGGGAAAT (2) 95.1 0.0951 P4.5 retina GCAGCCTGGG TAAGGGAAAT (2) TAAGGGGAAA TAAGGGGAAT 148.6 0.1486 P6.5 retina AGACCCTAAG (2) TAAGGGAAAT (2) TATACCGAAT TCAGGGAACA 75 0.075 P10.5 crx- retina AGACCCTAAG (2) AGTTTCCAGC GTTGGAGCAC (2) TAAGGGAAAT (2) TATACCGAAT 76.2 0.0762 P10.5 crx+ retina GCAGCCTGGG GTGGAGGCAG (2) TAAGGGAAAA TAAGGGAAAT (2) TAAGGGGAAA TAAGGGGAAT 107.5 0.1075 Adult retinal AGTTTCCAGC GTGGAGGCAG (2) GTTGGAGCAC (2) TAAGGGAAAA TAAGGGAAAT (2) 40.9 0.0409 ONL GAGGAGGGGG (3) TAAGGGAAAA TAAGGGAAAT (2) 34.5 0.0345