| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TCAAAAAAAA (2) TCATTAAAAA (4) TCCAAAAAAA (2) TCTTACTTAG
| 24.4 | 0.0244 |
| Cb medulloblastoma | TCAAAAAAAA (2) TCATTAAAAA (4) TCCAAAAAAA (2)
| 108.6 | 0.1086 |
| P8 GC+1d culture | GCCAAAACAA TAAGAAACCC TCAAAAAAAA (2) TCCAAAAAAA (2)
| 21.6 | 0.0216 |
| P8 GC+SHH+1d culture | GCCAAAACAA GTGATGTTTA TCAAAAAAAA (2) TCCAAAAAAA (2)
| 62.1 | 0.0621 |
| 3T3 fibroblasts | TCAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | GCCAAAACAA TCAAAAAAAA (2)
| 19.7 | 0.0197 |
| P1 cortex | TCAAAAAAAA (2)
| 22.7 | 0.0227 |
| Hypothalamus | GCCAAAACAA TCAAAAAAAA (2) TCATTAAAAA (4) TCATTTAAAA TCCAAAAAAA (2)
| 50.6 | 0.0506 |
| E12.5 retina | GCCAAAACAA TCAAAAAAAA (2)
| 20.7 | 0.0207 |
| E14.5 retina | GCCAAAACAA TCAAAAAAAA (2) TCATTAAAAA (4)
| 45.5 | 0.0455 |
| E16.5 retina | GCCAAAACAA GTGATGTTTA TCAAAAAAAA (2) TCATTTAAAA
| 25.3 | 0.0253 |
| E18.5 retina | GCCAAAACAA TCAAAAAAAA (2) TCCAAAAAAA (2)
| 58.2 | 0.0582 |
| P0.5 retina | GCCAAAACAA GTGATGTTTA TCAAAAAAAA (2) TCATTAAAAA (4) TCATTTAAAA
| 39.4 | 0.0394 |
| P2.5 retina | TAAGAAACCC TCAAAAAAAA (2) TCCAAAAAAA (2) TCTTACTTAG
| 40.6 | 0.0406 |
| P4.5 retina | GCCAAAACAA TCAAAAAAAA (2) TCCAAAAAAA (2)
| 43.6 | 0.0436 |
| P6.5 retina | GCCAAAACAA TCAAAAAAAA (2) TCATTTAAAA TCCAAAAAAA (2)
| 38.4 | 0.0384 |
| P10.5 crx- retina | TCAAAAAAAA (2) TCTTACTTAG
| 16.8 | 0.0168 |
| P10.5 crx+ retina | GCCAAAACAA TAAGAAACCC TCAAAAAAAA (2)
| 21.1 | 0.0211 |
| Adult retinal | TCAAAAAAAA (2) TCCAAAAAAA (2)
| 24.1 | 0.0241 |
| ONL | GTGATGTTTA TCAAAAAAAA (2)
| 17.2 | 0.0172 |