Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262676	Jarid1d	jumonji, AT rich interactive domain 1D (Rbp2 like)	Y	Y 2.03 cM	20592
Gene Ontology	DNA binding | intracellular | nucleus | regulation of transcription, DNA-dependent
Human Homolog	JARID1D[Jumonji, AT rich interactive domain 1D (RBP2-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCACACAGA (2) 6.5 0.0065 Cb medulloblastoma ACATCCCAGG TGCACACAGA (2) 4.6 0.0046 P8 GC+1d culture ACATCCCAGG ATAATACACA TGCACACAGA (2) 6.8 0.0068 P8 GC+SHH+1d culture ATAATACACA 2.3 0.0023 3T3 fibroblasts TGCACACAGA (2) 7 0.007 E15 cortex TGCACACAGA (2) 4.9 0.0049 P1 cortex TGCACACAGA (2) 9.1 0.0091 Hypothalamus TGCACACAGA (2) TTGAAGAATC 9 0.009 E12.5 retina ATAATACACA TGCACACAGA (2) 13.2 0.0132 E14.5 retina ATAATACACA TGCACACAGA (2) 5.4 0.0054 E16.5 retina ATAATACACA CCTGTGCATA (2) TGCACACAGA (2) TTGAAGAATC 10.8 0.0108 E18.5 retina ATAATACACA CCTGTGCATA (2) 3.6 0.0036 P0.5 retina TGCACACAGA (2) 7.9 0.0079 P2.5 retina ATAATACACA TGCACACAGA (2) 8.8 0.0088 P4.5 retina ATAATACACA 4 0.004 P10.5 crx- retina TGCACACAGA (2) 11.1 0.0111 P10.5 crx+ retina ACATCCCAGG CCTGTGCATA (2) TGCACACAGA (2) 13.4 0.0134 Adult retinal TGCACACAGA (2) 13 0.013 ONL ATAATACACA TGCACACAGA (2) 7.6 0.0076