| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACCTCTTTC CCAAAAAAAA (3) CCAGAAAAAA (2) GTTTATCAGC
| 30.9 | 0.0309 |
| Cb medulloblastoma | AACCTCTTTC CCAAAAAAAA (3) CCAGAAAAAA (2) TGCTAGGCCC
| 97.1 | 0.0971 |
| P8 GC+1d culture | CCAAAAAAAA (3) CCAGAAAAAA (2) GTTTATCAGC
| 42.2 | 0.0422 |
| P8 GC+SHH+1d culture | AACCTCTTTC CCAAAAAAAA (3) CCAGAAAAAA (2) GAGTATCTTG (4)
| 44.5 | 0.0445 |
| 3T3 fibroblasts | TGCTAGGCCC
| 3.5 | 0.0035 |
| E15 cortex | CCAAAAAAAA (3) CCAGAAAAAA (2)
| 14.8 | 0.0148 |
| P1 cortex | CCAAAAAAAA (3) CCAGAAAAAA (2)
| 45.4 | 0.0454 |
| Hypothalamus | CCAAAAAAAA (3) GAGTATCTTG (4)
| 39.8 | 0.0398 |
| E12.5 retina | AACCTCTTTC CCAAAAAAAA (3) GAGTATCTTG (4) GTTTATCAGC
| 24.5 | 0.0245 |
| E14.5 retina | AACCTCTTTC CCAAAAAAAA (3) CCAGAAAAAA (2) GTTTATCAGC
| 23.6 | 0.0236 |
| E16.5 retina | AACCTCTTTC CCAAAAAAAA (3) GAGTATCTTG (4)
| 21.7 | 0.0217 |
| E18.5 retina | CCAAAAAAAA (3) CCAGAAAAAA (2) GTTTATCAGC
| 45.4 | 0.0454 |
| P0.5 retina | CCAAAAAAAA (3) GAGTATCTTG (4)
| 31.4 | 0.0314 |
| P2.5 retina | AACCTCTTTC CCAAAAAAAA (3) CCAGAAAAAA (2)
| 47.6 | 0.0476 |
| P4.5 retina | AACCTCTTTC CCAAAAAAAA (3) GAGTATCTTG (4) GTTTATCAGC
| 47.6 | 0.0476 |
| P6.5 retina | CCAAAAAAAA (3) CCAGAAAAAA (2) GAGTATCTTG (4)
| 45 | 0.045 |
| P10.5 crx- retina | CCAAAAAAAA (3) CCAGAAAAAA (2) GAGTATCTTG (4)
| 18.7 | 0.0187 |
| P10.5 crx+ retina | CCAAAAAAAA (3) CCAGAAAAAA (2)
| 40.3 | 0.0403 |
| Adult retinal | CCAAAAAAAA (3) CCAGAAAAAA (2) TGCTAGGCCC
| 40.8 | 0.0408 |
| ONL | CCAAAAAAAA (3)
| 7.7 | 0.0077 |