Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.263539	2210420L05Rik	RIKEN cDNA 2210420L05 gene	10		78384
Mm.263539	Pah	phenylalanine hydroxylase	10	10 47.0 cM	18478
Gene Ontology	amino acid binding | aromatic amino acid family metabolism | catalytic activity | iron ion binding | metabolism | monooxygenase activity | oxidoreductase activity | phenylalanine 4-monooxygenase activity | phenylalanine catabolism
Human Homolog	PAH[phenylalanine hydroxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGCTTTCA (3) TACACACCTG 31 0.031 Cb medulloblastoma CCCAGCTTTT (3) CTGGCTTTCA (3) GAACCAGAAA GCAGCTGTTG (5) 18.4 0.0184 P8 GC+1d culture AACCAGAAAA (2) CTGGCTTTCA (3) TACACACCTG 26.2 0.0262 P8 GC+SHH+1d culture AACCAGAAAA (2) CTGGCTTTCA (3) GCAGCCATCT TACACACCTG 33.9 0.0339 3T3 fibroblasts CTGGCTTTCA (3) TACACACCTG 63.1 0.0631 E15 cortex CTGGCTTTCA (3) TACACACCTG 24.7 0.0247 P1 cortex CTGGCTTTCA (3) GCTCACTTAC (2) TACACACCTG 27.2 0.0272 Hypothalamus ACAGAAAGTG (3) CCCAGCTTTT (3) CTGGCTTTCA (3) GCAGCCATCT TACACACCTG 19.9 0.0199 E12.5 retina CTGGCTTTCA (3) 15 0.015 E14.5 retina AACCAGAAAA (2) CTGGCTTTCA (3) GCAGCCATCT 32.8 0.0328 E16.5 retina CTGGCTCTCA CTGGCTTTCA (3) GCAGCCATCT 25.3 0.0253 E18.5 retina CCCAGCTTTT (3) CTGGCTTTCA (3) GCAGCCATCT GCAGCTGTTG (5) 14.5 0.0145 P0.5 retina CTGGCTTTCA (3) GCAGCCATCT TACACACCTG 21.6 0.0216 P2.5 retina AACCAGAAAA (2) CTGGCTCTCA CTGGCTTTCA (3) TACACACCTG 42.3 0.0423 P4.5 retina ACAGAAAGTG (3) CTGGCTTTCA (3) TACACACCTG 19.9 0.0199 P6.5 retina AACCAGAAAA (2) CTGGCTTTCA (3) TACACACCTG 31.7 0.0317 P10.5 crx- retina AACCAGAAAA (2) ACAGAAAGTG (3) GCTCACTTAC (2) 7.5 0.0075 P10.5 crx+ retina GCAGCCATCT TACACACCTG 11.5 0.0115 Adult retinal CCCAGCTTTT (3) CTGGCTTTCA (3) GCAGCCATCT GCTCACTTAC (2) TACACACCTG 29.8 0.0298 ONL CTGGCTTTCA (3) GCAGCTGTTG (5) TACACACCTG 7.6 0.0076