| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCAAAAAAAA (2) GGAAAAAAAG (2) GTAAAAAAAG (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTCTTCAGG
| 102.8 | 0.1028 |
| Cb medulloblastoma | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 245.1 | 0.2451 |
| P8 GC+1d culture | GCAAAAAAAA (2) GCAAAAAAAG GCTTCTGTGC GGCCAGCTCT TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTCTTCAGG
| 131.1 | 0.1311 |
| P8 GC+SHH+1d culture | CACATTACAT GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTAGGT (3) TTTGAAAGAA
| 189.9 | 0.1899 |
| 3T3 fibroblasts | GCAAAAAAAA (2) GGCCAGCTCT TAAAAAAAAA (3) TCACCTGTGG
| 52.5 | 0.0525 |
| E15 cortex | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG
| 44.4 | 0.0444 |
| P1 cortex | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2)
| 81.7 | 0.0817 |
| Hypothalamus | CACATTACAT GAACATCTAA (2) GCAAAAAAAA (2) GCAAAAAAAG GTAAAAAAAG (2) TAAAAAAAAA (3) TCACCTGTGG TCTGCACAAA (2) TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTAGGT (3) TTTCTTCAGG TTTGAAAGAA
| 121.2 | 0.1212 |
| E12.5 retina | GCAAAAAAAA (2) GTAAAAAAAG (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTAGGT (3) TTTGAAAGAA
| 69.6 | 0.0696 |
| E14.5 retina | GCAAAAAAAA (2) GCAAAAAAAG TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 96.6 | 0.0966 |
| E16.5 retina | GCAAAAAAAA (2) GCTTCTGTGC TAAAAAAAAA (3) TCACCTGTGG TCTGCACAAA (2) TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 74.2 | 0.0742 |
| E18.5 retina | CACATTACAT GCAAAAAAAA (2) GCAAAAAAAG TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTCAGG
| 218.2 | 0.2182 |
| P0.5 retina | GCAAAAAAAA (2) GCTTCTGTGC TAAAAAAAAA (3) TCACCTGTGG TCTGCACAAA (2) TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 88.6 | 0.0886 |
| P2.5 retina | GAACATCTAA (2) GCAAAAAAAA (2) GGAAAAAAAG (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTAGGT (3)
| 162.1 | 0.1621 |
| P4.5 retina | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3) TTTCTTAGGT (3) TTTCTTCAGG TTTGAAAGAA
| 237.8 | 0.2378 |
| P6.5 retina | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 125.2 | 0.1252 |
| P10.5 crx- retina | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TCTGCACAAA (2) TTAAAAAAAA (2) TTATCAGTCG
| 72.5 | 0.0725 |
| P10.5 crx+ retina | GAACATCTAA (2) GCAAAAAAAA (2) GCAAAAAAAG TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTCTTAGGT (3) TTTCTTCAGG
| 80.7 | 0.0807 |
| Adult retinal | GCAAAAAAAA (2) TAAAAAAAAA (3) TCACCTGTGG TCTGCACAAA (2) TTAAAAAAAA (2) TTATCAGTCG
| 57.5 | 0.0575 |
| ONL | GCAAAAAAAA (2) GTTCTGTGCC TAAAAAAAAA (3) TCACCTGTGG TTAAAAAAAA (2) TTATCAGTCG TTTAAAAAAA (3)
| 57.4 | 0.0574 |