| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) AATCAGGATG
| 210.4 | 0.2104 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAATAAAAAA (2)
| 802.4 | 0.8024 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAGGACTTTG (2) CAGACAGTCT (4)
| 211.1 | 0.2111 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) AGCTAAATAC
| 289.2 | 0.2892 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) CAGACAGTCT (4)
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) AAATAAAAAA (2)
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) AGCTAAATAC
| 134 | 0.134 |
| E12.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2)
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) CAGACAGTCT (4)
| 103.8 | 0.1038 |
| E16.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2) CAGACAGTCT (4)
| 47.1 | 0.0471 |
| E18.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2)
| 385.6 | 0.3856 |
| P0.5 retina | AAAAAAAAAA (2) CAGACAGTCT (4)
| 121.7 | 0.1217 |
| P2.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2)
| 336.2 | 0.3362 |
| P4.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2)
| 289.2 | 0.2892 |
| P6.5 retina | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2)
| 281.8 | 0.2818 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) AATCAGGATG
| 53.9 | 0.0539 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAATAAAAAA (2) AGCTAAATAC CAGACAGTCT (4)
| 103.7 | 0.1037 |
| Adult retinal | AAAAAAAAAA (2) AAATAAAAAA (2) CAGACAGTCT (4)
| 61.2 | 0.0612 |
| ONL | AAAAAAAAAA (2) AAATAAAAAA (2) AAGGACTTTG (2) AATCAGGATG
| 111 | 0.111 |