| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTGAGAACA GGGGCTCACA (4) TGGTTGCTGG TTTAAAAAAT
| 76.6 | 0.0766 |
| Cb medulloblastoma | ATTGAGAACA TGGTTGCTGG TTGGTTAAAT (2)
| 122.5 | 0.1225 |
| P8 GC+1d culture | AGGCTCCAGG ATTGAGAACA CAGCTCATCG GAGAGCCTGA GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTGGTTAAAT (2) TTTAAAAAAT
| 70.6 | 0.0706 |
| P8 GC+SHH+1d culture | CAGCTCATCG TGAATATTTT TGGTTGCTGG TTGGTTAAAT (2)
| 98.4 | 0.0984 |
| 3T3 fibroblasts | TGGTTGCTGG TTCTTTTATT (2)
| 224.3 | 0.2243 |
| E15 cortex | CTAGCTTTGG GGGGCTCACA (4) TGGTTGCTGG
| 336.4 | 0.3364 |
| P1 cortex | ATTGAGAACA GGGGCTCACA (4) TGGTTGCTGG TTGGTTAAAT (2)
| 113.6 | 0.1136 |
| Hypothalamus | CAGCTCATCG GAGAGCCTGA GGGGCTCACA (4) TGGTTGCTGG TTCTTTTATT (2) TTGGTTAAAT (2) TTTTAATGTC
| 396.6 | 0.3966 |
| E12.5 retina | GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTGGTTAAAT (2)
| 197.2 | 0.1972 |
| E14.5 retina | GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTGGTTAAAT (2)
| 994.8 | 0.9948 |
| E16.5 retina | AGGCTCCAGG GGAAACTGAG GGGGCTCACA (4) TGGTTGCTGG
| 807.7 | 0.8077 |
| E18.5 retina | ATTGAGAACA GGGGCTCACA (4) TGGTTGCTGG TTCTTTTATT (2) TTGGTTAAAT (2) TTTTAATGTC
| 334.6 | 0.3346 |
| P0.5 retina | AGGCTCCAGG GGGGCTCACA (4) TGGTTGCTGG
| 229.7 | 0.2297 |
| P2.5 retina | CAGCTCATCG GGGGCTCACA (4) TGGTTGCTGG TTGGTTAAAT (2)
| 235.8 | 0.2358 |
| P4.5 retina | CAGCTCATCG GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTTAAAAAAT TTTTAATGTC
| 188.3 | 0.1883 |
| P6.5 retina | ATTGAGAACA GAGAGCCTGA GGGGCTCACA (4) TGGTTGCTGG TTTAAAAAAT
| 205.2 | 0.2052 |
| P10.5 crx- retina | AGGCTCCAGG GGGGCTCACA (4) TGGTTGCTGG TTGGTTAAAT (2) TTTTAATGTC
| 310.4 | 0.3104 |
| P10.5 crx+ retina | AGGCTCCAGG CTAGCTTTGG GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTCTTTTATT (2)
| 130.6 | 0.1306 |
| Adult retinal | GGGGCTCACA (4) TGGTTGCTGG TTGGTTAAAT (2)
| 248.2 | 0.2482 |
| ONL | GGAAACTGAG GGGGCTCACA (4) TGAATATTTT TGGTTGCTGG TTGGTTAAAT (2)
| 450.1 | 0.4501 |