| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACAGGGAGG (4) TGTGTGTGTG (2)
| 29.3 | 0.0293 |
| Cb medulloblastoma | ACAGACTTAA TGTGTGTGTG (2)
| 34.7 | 0.0347 |
| P8 GC+1d culture | CACAGGGAGG (4) TGTGTGTGTG (2)
| 28.5 | 0.0285 |
| P8 GC+SHH+1d culture | TGTGTGTGTG (2) TTTTGTTTTG (2)
| 30.4 | 0.0304 |
| 3T3 fibroblasts | CACAGGGAGG (4) TGTGTGTGTG (2)
| 31.5 | 0.0315 |
| E15 cortex | GCTTTATGAG
| 4.9 | 0.0049 |
| P1 cortex | TGTGTGTGTG (2)
| 18.2 | 0.0182 |
| Hypothalamus | TGTGTGTGTG (2)
| 25.4 | 0.0254 |
| E12.5 retina | TGTGTGTGTG (2)
| 43.2 | 0.0432 |
| E14.5 retina | TGTGTGTGTG (2)
| 54.7 | 0.0547 |
| E16.5 retina | CACAGGGAGG (4) GGACGAAAGC (2) TGTGTGTGTG (2)
| 43.4 | 0.0434 |
| E18.5 retina | TGTGTGTGTG (2)
| 47.3 | 0.0473 |
| P0.5 retina | TGTGTGTGTG (2)
| 21.6 | 0.0216 |
| P2.5 retina | ACAGACTTAA TGTGTGTGTG (2)
| 37 | 0.037 |
| P4.5 retina | CACAGGGAGG (4) GGACGAAAGC (2) TGTGTGTGTG (2)
| 53.6 | 0.0536 |
| P6.5 retina | TGTGTGTGTG (2)
| 41.7 | 0.0417 |
| P10.5 crx- retina | ACAGACTTAA GGACGAAAGC (2) TGTGTGTGTG (2) TTTTGTTTTG (2)
| 65.1 | 0.0651 |
| P10.5 crx+ retina | GGACGAAAGC (2) TGTGTGTGTG (2) TTTTGTTTTG (2)
| 48 | 0.048 |
| Adult retinal | ACAGACTTAA TGTGTGTGTG (2) TTTTGTTTTG (2)
| 57.5 | 0.0575 |
| ONL | GCTTTATGAG TGTGTGTGTG (2)
| 24.9 | 0.0249 |