Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266668	BC005537	cDNA sequence BC005537	13		79555
Human Homolog	C6orf62[chromosome 6 open reading frame 62]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTCCTTTGG ATTCCGAATT (2) CACAGAAAAA CACAGAACAC GATCTGGCTG (2) GGCTGTTGAA TGGCTAAACT TTGTCTGTGT TTTGTGCTGG TTTGTTTTCT (2) 52.1 0.0521 Cb medulloblastoma CACAGAAAAA GGACAAGGAA GGCTGTTGAA GTGATTTTCC (2) GTTTTGGTGT TAACCCCCAA TGGCTAAACT TTTGTTTTCT (2) 110.9 0.1109 P8 GC+1d culture AGTCCATTTT (2) CACAGAACAC GATCTGGCTG (2) GGCTGTTGAA TAAGGACGGA (3) TGGCTAAACT TTGTCTGTGT TTTGTGCTGG TTTGTTTTCT (2) 46.7 0.0467 P8 GC+SHH+1d culture AGTCCATTTT (2) GATCTGGCTG (2) GGCTGTTGAA TGGCTAAACT TTGTCTGTGT TTTGTTTTCT (2) 45.8 0.0458 3T3 fibroblasts GGCTGTTGAA 7 0.007 E15 cortex TTTGTGCTGG TTTGTTTTCT (2) 9.8 0.0098 P1 cortex GATCTGGCTG (2) GTGATTTTCC (2) TAACCCCCAA TGGCTAAACT TTTGTTTTCT (2) 40.7 0.0407 Hypothalamus GATCTGGCTG (2) GCCCAGTGCA GGCTGTTGAA TGGCTAAACT TTTGTTTTCT (2) 90.5 0.0905 E12.5 retina GATCTGGCTG (2) GGACAAGGAA GGCTGTTGAA TGGCTAAACT 24.5 0.0245 E14.5 retina AGTCCATTTT (2) CACAGAACAC TAAGGACGGA (3) TTGTCTGTGT 9 0.009 E16.5 retina AGTCCATTTT (2) GCCCAGTGCA GGCTGTTGAA TTTGTGCTGG TTTGTTTTCT (2) 25.3 0.0253 E18.5 retina CACAGAACAC GGCTGTTGAA TAACCCCCAA TTTGTTTTCT (2) 38.2 0.0382 P0.5 retina AGTCCATTTT (2) CACAGAACAC GGCTGTTGAA GTTTTGGTGT TAACCCCCAA TGGCTAAACT TTTGTTTTCT (2) 29.5 0.0295 P2.5 retina CACAGAAAAA GATCTGGCTG (2) GCCCAGTGCA GGACAAGGAA GGCTGTTGAA GTGATTTTCC (2) TAACCCCCAA TGGCTAAACT TTTGTGCTGG TTTGTTTTCT (2) 44.2 0.0442 P4.5 retina ATTCCGAATT (2) CACAGAACAC GGCTGTTGAA GTTTTGGTGT TAACCCCCAA TAAGGACGGA (3) TGGCTAAACT 25.9 0.0259 P6.5 retina ATTCCGAATT (2) CACAGAACAC GATCTGGCTG (2) GGCTGTTGAA GTGATTTTCC (2) TAACCCCCAA TGGCTAAACT TTGTCTGTGT TTTGTTTTCT (2) 40 0.04 P10.5 crx- retina AGTCCATTTT (2) GCCCAGTGCA GGCTGTTGAA TAACCCCCAA TAAGGACGGA (3) TGGCTAAACT TTGTCTGTGT TTTGTTTTCT (2) 24.3 0.0243 P10.5 crx+ retina AGTCCATTTT (2) GATCTGGCTG (2) GGCTGTTGAA TAACCCCCAA TGGCTAAACT TTTGTTTTCT (2) 28.7 0.0287 Adult retinal ACTCCTTTGG CACAGAACAC GATCTGGCTG (2) GTGATTTTCC (2) TAACCCCCAA TGGCTAAACT TTGTCTGTGT TTTGTTTTCT (2) 26.2 0.0262 ONL ATTCCGAATT (2) GATCTGGCTG (2) GGCTGTTGAA GTGATTTTCC (2) TAACCCCCAA TGGCTAAACT 28.6 0.0286