Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266767	Vapa	vesicle-associated membrane protein, associated protein A	17		30960
Mm.266767	AA517753	expressed sequence AA517753	17		106498
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATATTAGCAA (2) GCAGAATTTT (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 37.5 0.0375 Cb medulloblastoma CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 43.8 0.0438 P8 GC+1d culture ATATTAGCAA (2) GCAGAATTTT (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 23.9 0.0239 P8 GC+SHH+1d culture CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 32.8 0.0328 3T3 fibroblasts GTCACCGCGG (2) 10.5 0.0105 E15 cortex GTCACCGCGG (2) 9.9 0.0099 P1 cortex GTCACCGCGG (2) TGTGTTGGAA 9 0.009 Hypothalamus ATATTAGCAA (2) GCAGAATTTT (2) GTATTTAACA (2) GTCACCGCGG (2) GTCACCGGGG (2) TGTGTTGGAA 36.1 0.0361 E12.5 retina CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 31.9 0.0319 E14.5 retina GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 12.7 0.0127 E16.5 retina ATATTAGCAA (2) GCAGAATTTT (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) GTCACCGGGG (2) 30.7 0.0307 E18.5 retina GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 18.2 0.0182 P0.5 retina CAGAGTGCTG (2) GTATTTAACA (2) 11.8 0.0118 P2.5 retina CAGAGTGCTG (2) GTATTTAACA (2) GTCACCGCGG (2) GTCACCGGGG (2) 28.2 0.0282 P4.5 retina GTATTTAACA (2) GTCACCGCGG (2) TGTGTTGGAA 25.7 0.0257 P6.5 retina CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 18.4 0.0184 P10.5 crx- retina ATATTAGCAA (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) GTCACCGGGG (2) 29.8 0.0298 P10.5 crx+ retina ATATTAGCAA (2) CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) GTCACCGCGG (2) 30.8 0.0308 Adult retinal GTATTTAACA (2) TGTGTTGGAA 3.8 0.0038 ONL CAGAGTGCTG (2) GCCCGCGGTG (2) GTATTTAACA (2) 11.4 0.0114