| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 19.6 | 0.0196 |
| Cb medulloblastoma | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 30 | 0.03 |
| P8 GC+1d culture | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 19.4 | 0.0194 |
| P8 GC+SHH+1d culture | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 15.3 | 0.0153 |
| 3T3 fibroblasts | AGGGTGTGAA (2) CCAGCCTGTG (2) GCTGACTCCG (2) TGAGACTGTG (2)
| 42 | 0.042 |
| E15 cortex | CCAGCCTGTG (2)
| 9.9 | 0.0099 |
| P1 cortex | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 13.5 | 0.0135 |
| Hypothalamus | AAAAATAAAA (3) CCAGCCTGTG (2)
| 19.9 | 0.0199 |
| E12.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 13.2 | 0.0132 |
| E14.5 retina | AAAAATAAAA (3) GCTGACTCCA GCTGACTCCG (2)
| 23.7 | 0.0237 |
| E16.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCA GCTGACTCCG (2)
| 25.3 | 0.0253 |
| E18.5 retina | AAAAATAAAA (3) GAAGGTTTCC GCTGACTCCG (2)
| 21.8 | 0.0218 |
| P0.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 21.6 | 0.0216 |
| P2.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 15.9 | 0.0159 |
| P4.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2)
| 17.8 | 0.0178 |
| P6.5 retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 26.6 | 0.0266 |
| P10.5 crx- retina | AAAAATAAAA (3) CCAGCCTGTG (2) GAAGGTTTCC GCTGACTCCG (2)
| 27.9 | 0.0279 |
| P10.5 crx+ retina | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 11.5 | 0.0115 |
| Adult retinal | AAAAATAAAA (3) CCAGCCTGTG (2) GCTGACTCCG (2)
| 13.1 | 0.0131 |
| ONL | CCAGCCTGTG (2) GCTGACTCCA
| 5.7 | 0.0057 |