Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.267116 AW743275expressed sequence AW743275 12    105052 
 Mm.267116 9530091C08RikRIKEN cDNA 9530091C08 gene 9    320440 
 Mm.267116 RoraRAR-related orphan receptor alpha 9  9 36.0 cM  19883 
 Gene Ontology DNA binding | ligand-dependent nuclear receptor activity | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity
 Human Homolog RORA[RAR-related orphan receptor A]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCGGCAGAGT (3)
CTGGCTGAGG (2)
CTTGTATGTG
4.80.0048
Cb medulloblastomaTACACCAGAA (4)
TGTGCATTTT (5)
4.60.0046
P8 GC+1d cultureCCGGCAGAGT (3)
TGTGCATTTT (5)
3.40.0034
P8 GC+SHH+1d cultureAAGGAAGATT (5)
CTGGCTGAGG (2)
CTTGTATGTG
4.70.0047
P1 cortexAAGGAAGATT (5)
CTTGTATGTG
90.009
HypothalamusCTGGCTGAGG (2)
5.40.0054
E12.5 retinaCCGGCAGAGT (3)
CTTGTATGTG
TGTGCATTTT (5)
9.50.0095
E14.5 retinaCTTGTATGTG
TACACCAGAA (4)
TACCCCAGAA (3)
TCTTTCCAGT (3)
90.009
E16.5 retinaCCGGCAGAGT (3)
1.80.0018
E18.5 retinaTACCCCAGAA (3)
1.80.0018
P2.5 retinaCTTGTATGTG
TCTTTCCAGT (3)
TGTGCATTTT (5)
7.10.0071
P4.5 retinaCCGGCAGAGT (3)
TACACCAGAA (4)
TCTTTCCAGT (3)
TGTGCATTTT (5)
100.01
P6.5 retinaTGTGCATTTT (5)
3.30.0033
P10.5 crx+ retinaAAGGAAGATT (5)
CTTGTATGTG
TGTGCATTTT (5)
7.60.0076
Adult retinalCCGGCAGAGT (3)
CTTGTATGTG
TACACCAGAA (4)
TCTTTCCAGT (3)
7.60.0076
ONLTACACCAGAA (4)
TCTTTCCAGT (3)
TGTGCATTTT (5)
13.30.0133