Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267478	Acsl6	acyl-CoA synthetase long-chain family member 6	11	11 29.35 cM	216739
Gene Ontology	catalytic activity | fatty acid metabolism | integral to membrane | ligase activity | long-chain-fatty-acid-CoA ligase activity | long-chain-fatty-acid-CoA ligase activity | magnesium ion binding | metabolism | mitochondrion | neuroblast proliferation | protein binding
Human Homolog	ACSL6[acyl-CoA synthetase long-chain family member 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGATGCTGG (2) 3.3 0.0033 Cb medulloblastoma AACAGCAAAT 4.6 0.0046 P8 GC+1d culture AACAGCAAAT AGACCCTCTC (2) ATGATGATGG (2) 5.6 0.0056 P8 GC+SHH+1d culture AACAGCAAAT AGACCCTCTC (2) CCCACCAAGA 8.3 0.0083 3T3 fibroblasts AGACCCTCTC (2) ATGATGATGG (2) CCCACCAAGA 10.5 0.0105 E15 cortex ACCTCAGCTT (2) AGACCCTCTC (2) 9.8 0.0098 P1 cortex ATGATGATGG (2) 4.5 0.0045 Hypothalamus AGACCCTCTC (2) GCAAAGATTT GTGATGCTGG (2) TGAAAAATAA 9 0.009 E12.5 retina CCCACCAAGA 1.9 0.0019 E14.5 retina AACAGCAAAT ACCTCAGCTT (2) 7.3 0.0073 E16.5 retina AACAGCAAAT TGAAAAATAA 7.2 0.0072 E18.5 retina AACAGCAAAT GCAAAGATTT 3.6 0.0036 P0.5 retina AACAGCAAAT AGACCCTCTC (2) CCCACCAAGA GCAAAGATTT TTCTCTGTTC 17.7 0.0177 P2.5 retina AACAGCAAAT GTGGGTGGAA 5.3 0.0053 P4.5 retina AACAGCAAAT ATGATGATGG (2) GCAAAGATTT GTGGGTGGAA 13.9 0.0139 P6.5 retina AACAGCAAAT TTCTCTGTTC 10 0.01 P10.5 crx- retina AACAGCAAAT GTGATGCTGG (2) TTCTCTGTTC 16.7 0.0167 P10.5 crx+ retina AACAGCAAAT ATGATGATGG (2) GTGATGCTGG (2) GTGGGTGGAA 23 0.023 Adult retinal AACAGCAAAT ACCTCAGCTT (2) AGACCCTCTC (2) ATGATGATGG (2) CCCACCAAGA GCAAAGATTT GTGATGCTGG (2) 22.5 0.0225 ONL AACAGCAAAT ATGATGATGG (2) CCCACCAAGA GTGATGCTGG (2) TGAAAAATAA 24.9 0.0249