Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267514	Plxnb2	plexin B2	15	15 43.0 cM	140570
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATATTTTTTA CGGGACCCCA (2) GAGGTGCCGG (2) GCCACTTTAA (2) GCCTCCCCTT (2) GGAAGGGAGC GGGGTGCCCC GTGTTTATCA 30.8 0.0308 Cb medulloblastoma AGGCAGCCAG (2) ATATTTTTTA CGGGACCCCA (2) 9.2 0.0092 P8 GC+1d culture ATATTTTTTA ATGCAGAGGA (6) GCCTCCCCTT (2) GCCTTGGGCA 34.2 0.0342 P8 GC+SHH+1d culture ATATTTTTTA CGGGACCCCA (2) GCCTCCCCTT (2) GCCTTGGGCA GGAAGGGAGC 40.9 0.0409 3T3 fibroblasts AGCCTGGTGG (2) AGGCAGCCAG (2) GCCTCCCCTT (2) GCCTTGGGCA 21 0.021 E15 cortex GCCTCCCCTT (2) 14.8 0.0148 P1 cortex AGCCTGGTGG (2) AGGCAGCCAG (2) ATATTTTTTA GCCTCCCCTT (2) GCCTTGGGCA 22.5 0.0225 Hypothalamus AGGCAGCCAG (2) ATATTTTTTA ATGCAGAGGA (6) GAGGTGCCGG (2) GCCACTTTAA (2) 14.4 0.0144 E12.5 retina AGCCTGGTGG (2) AGGCAGCCAG (2) GCCTCCCCTT (2) GCCTTGGCAG GCCTTGGGCA 13.3 0.0133 E14.5 retina ACCTCCACCC AGGCAGCCAG (2) ATATTTTTTA GAGGTGCCGG (2) GCCTTGGCAG 23.6 0.0236 E16.5 retina AGGCAGCCAG (2) ATATTTTTTA CGGGACCCCA (2) GCCTCCCCTT (2) GCCTTGGCAG GGAAGGGAGC 27.1 0.0271 E18.5 retina ATATTTTTTA CGGGACCCCA (2) GCCTTGGCAG GGCACTGGGG (2) GGGGTGCCCC GTGTTTATCA 18 0.018 P0.5 retina AGCCTGGTGG (2) GCCTCCCCTT (2) GCCTTGGCAG 23.6 0.0236 P2.5 retina AGGCAGCCAG (2) ATATTTTTTA ATGCAGAGGA (6) CGGGACCCCA (2) GCCACTTTAA (2) GCCTTGGCAG 19.5 0.0195 P4.5 retina ACCTCCACCC ATATTTTTTA CGGGACCCCA (2) GCCTCCCCTT (2) GCCTTGGCAG 23.9 0.0239 P6.5 retina AGGCAGCCAG (2) ATATTTTTTA CGGGACCCCA (2) GCCTCCCCTT (2) GCCTTGGCAG GGAAGGGAGC 23.5 0.0235 P10.5 crx- retina ACCTCCACCC ATATTTTTTA CGGGACCCCA (2) GAGGTGCCGG (2) GCCTCCCCTT (2) GCCTTGGCAG GCCTTGGGCA GGAAGGGAGC 24.3 0.0243 P10.5 crx+ retina GCCTCCCCTT (2) GGAAGGGAGC GGCACTGGGG (2) 5.7 0.0057 Adult retinal ACCTCCACCC AGGCAGCCAG (2) CGGGACCCCA (2) GCCACTTTAA (2) GGGGTGCCCC 9.5 0.0095 ONL AGGCAGCCAG (2) ATATTTTTTA CGGGACCCCA (2) GGAAGGGAGC GGCACTGGGG (2) GTGTTTATCA 21 0.021