| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGACAGTGG (2) AATAAACTTA (6) TGTAAAATAA (2)
| 21.2 | 0.0212 |
| Cb medulloblastoma | AAGACAGTGG (2) AATAAACTTA (6) AGTTCAGCTG (2) CCCATTGGAG (4) TGTAAAATAA (2)
| 46.2 | 0.0462 |
| P8 GC+1d culture | AAGACAGTGC AAGACAGTGG (2) AATAAACTTA (6) AATCTTCAAG ACACCAGACC (2) AGTTCAGCTG (2) TGTAAAATAA (2)
| 28.4 | 0.0284 |
| P8 GC+SHH+1d culture | AAGACAGTGC AAGACAGTGG (2) AATAAACTTA (6) AGTATTCCTC CAGACGTATA (3) TGTAAAATAA (2) TGTCTATGCG (2)
| 21.2 | 0.0212 |
| 3T3 fibroblasts | AATAAACTTA (6)
| 3.5 | 0.0035 |
| E15 cortex | AATCTTCAAG
| 4.9 | 0.0049 |
| P1 cortex | TGTCTATGCG (2)
| 4.5 | 0.0045 |
| Hypothalamus | AATAAACTTA (6) CAGACGTATA (3) TGTAAAATAA (2)
| 21.7 | 0.0217 |
| E12.5 retina | AAGACAGTGG (2) AATAAACTTA (6) AATCTTCAAG TGTCTATGCG (2)
| 26.3 | 0.0263 |
| E14.5 retina | AATAAACTTA (6) CCCATTGGAG (4) TGTAAAATAA (2) TTTGAGAACA (3)
| 25.5 | 0.0255 |
| E16.5 retina | AAGACAGTGG (2) AATAAACTTA (6) CAGACGTATA (3) TGTAAAATAA (2)
| 16.2 | 0.0162 |
| E18.5 retina | AAGACAGTGG (2) AATAAACTTA (6) CAGACGTATA (3) TGTAAAATAA (2) TTTGAGAACA (3)
| 21.8 | 0.0218 |
| P0.5 retina | AATAAACTTA (6)
| 2 | 0.002 |
| P2.5 retina | AATAAACTTA (6) CAGACGTATA (3) CAGGTGAGCC (2) TGTAAAATAA (2)
| 30 | 0.03 |
| P4.5 retina | AAGACAGTGG (2) AATAAACTTA (6) AGTATTCCTC TGTAAAATAA (2) TTTGAGAACA (3)
| 39.7 | 0.0397 |
| P6.5 retina | AATAAACTTA (6) ACACCAGACC (2) AGTATTCCTC TGTAAAATAA (2)
| 26.7 | 0.0267 |
| P10.5 crx- retina | AATAAACTTA (6) AGTATTCCTC CAGACGTATA (3) TGTAAAATAA (2)
| 13 | 0.013 |
| P10.5 crx+ retina | AATAAACTTA (6) ACACCAGACC (2) AGTATTCCTC CAGGTGAGCC (2)
| 21.1 | 0.0211 |
| Adult retinal | AATAAACTTA (6) CAGGTGAGCC (2) TGTAAAATAA (2)
| 9.3 | 0.0093 |
| ONL | AAGACAGTGC AAGACAGTGG (2) AATAAACTTA (6) AGTATTCCTC AGTTCAGCTG (2) CAGGTGAGCC (2) TGTAAAATAA (2)
| 21 | 0.021 |