| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AGTGAGCTTA ATAAAAAAAA (2) GACAAGCTAC (3) GAGAAACACT
| 220.1 | 0.2201 |
| Cb medulloblastoma | AAAAAAAAAA (2) ATAAAAAAAA (2) GACAAGCTAC (3)
| 830.1 | 0.8301 |
| P8 GC+1d culture | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 210 | 0.21 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 299.8 | 0.2998 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2) GACAAGCTAC (3)
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 130.4 | 0.1304 |
| E12.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2) GACAAGCTAC (3) GAGAAACACT
| 154 | 0.154 |
| E14.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 111.1 | 0.1111 |
| E16.5 retina | AAAAAAAAAA (2) AGTGAGCTTA ATAAAAAAAA (2)
| 50.7 | 0.0507 |
| E18.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 405.6 | 0.4056 |
| P0.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2) GACAAGCTAC (3)
| 125.7 | 0.1257 |
| P2.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 343.2 | 0.3432 |
| P4.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 305.1 | 0.3051 |
| P6.5 retina | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 276.8 | 0.2768 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGTGAGCTTA ATAAAAAAAA (2) GACAAGCTAC (3)
| 54 | 0.054 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGTGAGCTTA ATAAAAAAAA (2) GACAAGCTAC (3) GAGAAACACT
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) GACAAGCTAC (3) GAGAAACACT
| 63 | 0.063 |
| ONL | AAAAAAAAAA (2) ATAAAAAAAA (2)
| 105.3 | 0.1053 |