| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA GTGGAGGAAG
| 19.6 | 0.0196 |
| Cb medulloblastoma | AGCAAGATGG (3) CTGAAAAAAA (2) TATGTTCAGC
| 27.7 | 0.0277 |
| P8 GC+1d culture | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 22.2 | 0.0222 |
| 3T3 fibroblasts | AGCAAGATGG (3)
| 7 | 0.007 |
| E15 cortex | CTGAAAAAAA (2)
| 4.9 | 0.0049 |
| P1 cortex | AGCAAGATGG (3) CTGAAAAAAA (2)
| 9 | 0.009 |
| Hypothalamus | AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 19.9 | 0.0199 |
| E12.5 retina | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2)
| 16.9 | 0.0169 |
| E14.5 retina | AAGCTAAAGG CTGAAAAAAA (2) GTGAAGAAAA TATGTTCAGC
| 14.6 | 0.0146 |
| E16.5 retina | AAGCTAAAGG CTGAAAAAAA (2) GTGAAGAAAA
| 18 | 0.018 |
| E18.5 retina | AAGCTAAAGG CTGAAAAAAA (2) GTGAAGAAAA
| 30.9 | 0.0309 |
| P0.5 retina | AGCAAGATGG (3) CTGAAAAAAA (2)
| 9.8 | 0.0098 |
| P2.5 retina | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 31.7 | 0.0317 |
| P4.5 retina | AGCAAGATGG (3) CTGAAAAAAA (2)
| 9.9 | 0.0099 |
| P6.5 retina | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 21.7 | 0.0217 |
| P10.5 crx- retina | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | AGCAAGATGG (3) CTGAAAAAAA (2) GTGAAGAAAA
| 11.5 | 0.0115 |
| Adult retinal | AAGCTAAAGG AGCAAGATGG (3) CTGAAAAAAA (2) GTGGAGGAAG
| 14.9 | 0.0149 |
| ONL | AGCAAGATGG (3) CTGAAAAAAA (2)
| 5.7 | 0.0057 |