| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA
| 35.9 | 0.0359 |
| Cb medulloblastoma | AGGCATTGAA ATACAATAAA (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3)
| 22.8 | 0.0228 |
| P8 GC+SHH+1d culture | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGAAAGA (2)
| 31.6 | 0.0316 |
| 3T3 fibroblasts | ATACAATAAA (3)
| 3.5 | 0.0035 |
| P1 cortex | ATACAATAAA (3)
| 13.6 | 0.0136 |
| Hypothalamus | AGGCATTGAA ATACAATAAA (3)
| 16.3 | 0.0163 |
| E12.5 retina | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGAAAGA (2) CCTTGGAAAG (3)
| 43.2 | 0.0432 |
| E14.5 retina | AGGCATTGAA ATACAATAAA (3) CCTTGGAAAG (3)
| 87.5 | 0.0875 |
| E16.5 retina | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3)
| 52.5 | 0.0525 |
| E18.5 retina | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3)
| 83.6 | 0.0836 |
| P0.5 retina | AGGCATTGAA ATACAATAAA (3)
| 17.7 | 0.0177 |
| P2.5 retina | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3) TTCAGGCTTT
| 26.5 | 0.0265 |
| P4.5 retina | AGGCATTGAA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3)
| 41.6 | 0.0416 |
| P6.5 retina | AAATACCTGA ATACAATAAA (3) ATCCAATAAA CCTTGGAAAG (3)
| 15 | 0.015 |
| P10.5 crx- retina | AAATACCTGA AGGCATTGAA ATACAATAAA (3) CCTTGAAAGA (2) TTCAGGCTTT
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AAATACCTGA ATACAATAAA (3)
| 23 | 0.023 |
| Adult retinal | AAATACCTGA TTCAGGCTTT
| 9.3 | 0.0093 |
| ONL | AAATACCTGA ATACAATAAA (3)
| 23 | 0.023 |