| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5) TGTTGGAAGC
| 52.1 | 0.0521 |
| Cb medulloblastoma | GGTCCCAGCA (2) TAAAAAAAAA (3) TTTAGATGGT
| 111 | 0.111 |
| P8 GC+1d culture | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5) TGTTGGAAGC
| 73 | 0.073 |
| P8 GC+SHH+1d culture | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5) TTTAGATGGT
| 106.5 | 0.1065 |
| 3T3 fibroblasts | GGTCCCAGCA (2) TAAAAAAAAA (3)
| 14 | 0.014 |
| E15 cortex | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5)
| 19.7 | 0.0197 |
| P1 cortex | AGCAGTACCC TAAAAAAAAA (3) TGCCCAGGGA (5)
| 59 | 0.059 |
| Hypothalamus | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5)
| 36.2 | 0.0362 |
| E12.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5)
| 33.8 | 0.0338 |
| E14.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5) TGTTGGAAGC TTTAGATGGT
| 49.1 | 0.0491 |
| E16.5 retina | TAAAAAAAAA (3) TGCCCAGGGA (5)
| 25.3 | 0.0253 |
| E18.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3)
| 110.9 | 0.1109 |
| P0.5 retina | GAGCAGTTTC (2) GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5)
| 57 | 0.057 |
| P2.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3)
| 77.5 | 0.0775 |
| P4.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5)
| 132.7 | 0.1327 |
| P6.5 retina | GGTCCCAGCA (2) TAAAAAAAAA (3) TGCCCAGGGA (5) TTTAGATGGT
| 80.1 | 0.0801 |
| P10.5 crx- retina | TAAAAAAAAA (3) TGCCCAGGGA (5)
| 13 | 0.013 |
| P10.5 crx+ retina | GGTCCCAGCA (2) TAAAAAAAAA (3)
| 26.9 | 0.0269 |
| Adult retinal | AGCAGTACCC TAAAAAAAAA (3)
| 22.2 | 0.0222 |
| ONL | GGTCCCAGCA (2) TAAAAAAAAA (3)
| 30.6 | 0.0306 |