| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAGAA AACAAAAAAA (2) CAGTGACTGC CAGTGACTGT GAGGCTCAAA GGATGAAGGC (2) TCCACTTGTC
| 234.9 | 0.2349 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAAAGAA AACAAAAAAA (2) CAGTGACTGC GGATGAAGGC (2)
| 841.6 | 0.8416 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAAAGAA AACAAAAAAA (2) CAGTGACTGC CAGTGACTGT GCGCTCGCTC (3) GGATGAAGGC (2)
| 230.4 | 0.2304 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAACAAA (4) AACAAAAAAA (2) CAGTGACTGC CAGTGACTGT GGATGAAGGC (2) TCCACTTGTC
| 317.4 | 0.3174 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CAGTGACTGT GGATGAAGGC (2)
| 38.5 | 0.0385 |
| E15 cortex | AAAAAAAAAA (2) AAAAAAAAAC (2) AACAAAAAAA (2) CAGTGACTGC GGATGAAGGC (2)
| 237.4 | 0.2374 |
| P1 cortex | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2)
| 272.7 | 0.2727 |
| Hypothalamus | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAGAA AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC GGATGAAGGC (2) TCCACTTGTC
| 161.1 | 0.1611 |
| E12.5 retina | AAAAAAAAAA (2) AAAAAAAGAA AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC CTTGTTCATT GGATGAAGGC (2) TCCACTTGTC
| 169.1 | 0.1691 |
| E14.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAT (2) AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC CTTGTTCATT GGATGAAGGC (2) GGGGGGTTTT TCCACTTGTC
| 136.5 | 0.1365 |
| E16.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAT (2) CAGTGACTGC CTTGTTCATT GGATGAAGGC (2) TCCACTTGTC
| 79.6 | 0.0796 |
| E18.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAACAAA (4) AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC CTTGTTCATT GGATGAAGGC (2) TCCACTTGTC
| 427.5 | 0.4275 |
| P0.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) AACAAAAAAA (2) CAGTGACTGC GAGGCTCAAA GCGCTCGCTC (3) GGATGAAGGC (2) GGGGGGTTTT TCCACTTGTC
| 151.3 | 0.1513 |
| P2.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAAAGAA AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC GGATGAAGGC (2) GGGGGGTTTT
| 373.1 | 0.3731 |
| P4.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AACAAAAAAA (2) CAACCAGTTA CAGTGACTGC GGATGAAGGC (2)
| 319.1 | 0.3191 |
| P6.5 retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAACAAA (4) CAACCAGTTA CAGTGACTGC GGATGAAGGC (2) GGGGGGTTTT TCCACTTGTC
| 300.2 | 0.3002 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAAAAAAAAC (2) AAAAAAAAAG AAAAAAAAAT (2) AACAAAAAAA (2) CAGTGACTGT GGATGAAGGC (2)
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAAAAAAAAG AACAAAAAAA (2) CAGTGACTGT GGATGAAGGC (2)
| 117.3 | 0.1173 |
| Adult retinal | AAAAAAAAAA (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAAAGAA CAGTGACTGC CTTGTTCATT GGATGAAGGC (2)
| 76.1 | 0.0761 |
| ONL | AAAAAAAAAA (2) AAAAAAAAAG AAAAAAAAAT (2) AAAAAAAGAA AAAAAACAAA (4) CAACCAGTTA GGATGAAGGC (2)
| 114.8 | 0.1148 |