| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCCTGCTGG (4) GGAAAGTCCT (3) TTTGATGGAT (5)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GGGGGGGGGG GTGGCATATA (5)
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAAGGGCCAA (4) GAATGAAGAA (4) GCCCTGCTGG (4) GGGGGGGGGG TTTGATGGAT (5)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | GAAGGGCCAA (4) GAATGAAGAA (4) GCCCTGCTGG (4) GGGGGGGGGG TTTGATGGAT (5)
| 15.2 | 0.0152 |
| 3T3 fibroblasts | GAAGGGCCAA (4) GGGGGGGGGG
| 14 | 0.014 |
| E15 cortex | GAAGGGCCAA (4) GGAAAGTCCT (3) GGGGGGGGGG GTGGCATATA (5)
| 19.6 | 0.0196 |
| P1 cortex | GAATGAAGAA (4) GGAAAGTCCT (3)
| 9 | 0.009 |
| Hypothalamus | GGGGGGGGGG
| 1.8 | 0.0018 |
| E12.5 retina | GAAGGGCCAA (4) GGAAAGTCCT (3)
| 3.8 | 0.0038 |
| E14.5 retina | GAAGGGCCAA (4)
| 1.8 | 0.0018 |
| E16.5 retina | GAATGAAGAA (4) GTGGCATATA (5) TTTGATGGAT (5)
| 5.4 | 0.0054 |
| E18.5 retina | GAAGGGCCAA (4)
| 1.8 | 0.0018 |
| P0.5 retina | GAAGGGCCAA (4)
| 5.9 | 0.0059 |
| P2.5 retina | GAAGGGCCAA (4) GCCCTGCTGG (4) GGGGGGGGGG GTGGCATATA (5) TAATGTGAGG (3) TTTGATGGAT (5)
| 26.4 | 0.0264 |
| P4.5 retina | GCCCTGCTGG (4) GGGGGGGGGG TAATGTGAGG (3)
| 17.8 | 0.0178 |
| P6.5 retina | GGGGGGGGGG GTGGCATATA (5)
| 5 | 0.005 |
| P10.5 crx- retina | GAAGGGCCAA (4) GCCCTGCTGG (4) GTGGCATATA (5)
| 5.7 | 0.0057 |
| P10.5 crx+ retina | GAAGGGCCAA (4) GAATGAAGAA (4) GGGGGGGGGG GTGGCATATA (5)
| 15.3 | 0.0153 |
| Adult retinal | GGGGGGGGGG
| 3.7 | 0.0037 |
| ONL | GCCCTGCTGG (4) GGGGGGGGGG
| 5.7 | 0.0057 |