| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GAAGTGGTCT GAGGTGCCGG (2) TTACAAAAAA TTTTTTTTTT (2)
| 213.6 | 0.2136 |
| Cb medulloblastoma | AAAAAAAAAA (2) GGGGGGGGGG TTACAAAAAA TTTTTTTTTT (2)
| 809.3 | 0.8093 |
| P8 GC+1d culture | AAAAAAAAAA (2) GGGGGGGGGG TGTCGGTAGA TTTTTTTTTT (2)
| 224.9 | 0.2249 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GGGGGGGGGG TGTCGGTAGA TGTGGCCTGG (2) TTTTTTTTTT (2)
| 296.3 | 0.2963 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GGGGGGGGGG
| 31.5 | 0.0315 |
| E15 cortex | AAAAAAAAAA (2) CTTTTTGAGG GGGGGGGGGG TTTTTTTTTT (2)
| 227.5 | 0.2275 |
| P1 cortex | AAAAAAAAAA (2) TGTCGGTAGA TGTGGCCTGG (2) TTTTTTTTTT (2)
| 263.5 | 0.2635 |
| Hypothalamus | AAAAAAAAAA (2) GAAGTGGTCT GAGGTGCCGG (2) GGGGGGGGGG TGTCGGTAGA TTTTTTTTTT (2)
| 141.2 | 0.1412 |
| E12.5 retina | AAAAAAAAAA (2) TTTTTTTTTT (2)
| 146.4 | 0.1464 |
| E14.5 retina | AAAAAAAAAA (2) GAGGTGCCGG (2) TGTCGGTAGA TTACAAAAAA TTTTTTTTTT (2)
| 125.6 | 0.1256 |
| E16.5 retina | AAAAAAAAAA (2) CTTTTTGAGG TTTTTTTTTT (2)
| 50.7 | 0.0507 |
| E18.5 retina | AAAAAAAAAA (2) CTTTTTGAGG TGTCGGTAGA TTTTTTTTTT (2)
| 391 | 0.391 |
| P0.5 retina | AAAAAAAAAA (2) TGTCGGTAGA TTACAAAAAA TTTTTTTTTT (2)
| 135.5 | 0.1355 |
| P2.5 retina | AAAAAAAAAA (2) CTTTTTGAGG GAAGTGGTCT GGGGGGGGGG TGTCGGTAGA TTTTTTTTTT (2)
| 350.2 | 0.3502 |
| P4.5 retina | AAAAAAAAAA (2) GGGGGGGGGG TGTCGGTAGA TTACAAAAAA TTTTTTTTTT (2)
| 307.1 | 0.3071 |
| P6.5 retina | AAAAAAAAAA (2) CTTTTTGAGG GGGGGGGGGG TGTCGGTAGA TTTTTTTTTT (2)
| 285.1 | 0.2851 |
| P10.5 crx- retina | AAAAAAAAAA (2) CTTTTTGAGG GAGGTGCCGG (2)
| 53.9 | 0.0539 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CTTTTTGAGG GGGGGGGGGG TGTGGCCTGG (2) TTACAAAAAA TTTTTTTTTT (2)
| 119 | 0.119 |
| Adult retinal | AAAAAAAAAA (2) GGGGGGGGGG TGTCGGTAGA TTTTTTTTTT (2)
| 72.2 | 0.0722 |
| ONL | AAAAAAAAAA (2) GCCTCCTTGT (2) GGGGGGGGGG TTTTTTTTTT (2)
| 114.8 | 0.1148 |