Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270569	5630401D24Rik	RIKEN cDNA 5630401D24 gene	1		71449
Gene Ontology	S-adenosylmethionine-dependent methyltransferase activity
Human Homolog	CGI-01[CGI-01 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGCTCACA 8.2 0.0082 Cb medulloblastoma GCAGCTCACA GGGGAAGGGG GGGGCTGGGG (2) GGGGGAGGGG (4) GGGGGGGGGG GGGGGTGGGG (2) 25.3 0.0253 P8 GC+1d culture ATGCCCTGCC GCAGCTCACA GGGGAAGGGG GGGGCTGGGG (2) GGGGGAGGGG (4) GGGGGGGGGG GGGGGTGGGG (2) 19.3 0.0193 P8 GC+SHH+1d culture AGCCACCACG (3) ATGCCCTGCC GCAGCTCACA GGGGCTGGGG (2) GGGGGGGGGG GGGGGTGGGG (2) 24.6 0.0246 3T3 fibroblasts GCAGCTCACA GGGGAAGGGG GGGGGAGGGG (4) GGGGGGGGGG GGGGGGTGGG (4) 28 0.028 E15 cortex AGCCACCACG (3) GCAGCTCACA GGGGGGGGGG 34.5 0.0345 P1 cortex GCAGCTCACA GGGGGAGGGG (4) GGGGGGTGGG (4) 13.5 0.0135 Hypothalamus ATGCCCTGCC GCAGCTCACA GGGGCTGGGG (2) GGGGGGGGGG GGGGGTGGGG (2) GTGGGGTTGG 18 0.018 E12.5 retina GCAGCTCACA GGGGGAGGGG (4) GGGGGTGGGG (2) GTGCTGGCCC (3) TTAGCTTCTG 18.9 0.0189 E14.5 retina AGCCACCACG (3) GCAGCTCACA GGGGCTGGGG (2) GGGGGTGGGG (2) TTAGCTTCTG 52.8 0.0528 E16.5 retina ATGCCCTGCC CTTCCACCTT GCAGCTCACA GGGGCTGGGG (2) 30.7 0.0307 E18.5 retina GCAGCTCACA GGGGCTGGGG (2) GGGGGAGGGG (4) 20 0.02 P0.5 retina ATGCCCTGCC GCAGCTCACA 17.7 0.0177 P2.5 retina ATGCCCTGCC GCAGCTCACA GGGGAAGGGG GGGGGAGGGG (4) GGGGGGGGGG GTGCTGGCCC (3) 22.9 0.0229 P4.5 retina GCAGCTCACA GGGGAAGGGG GGGGGGGGGG GGGGGTGGGG (2) 19.8 0.0198 P6.5 retina CTTCCACCTT GCAGCTCACA GGGGCTGGGG (2) GGGGGAGGGG (4) GGGGGGGGGG GGGGGGTGGG (4) 30 0.03 P10.5 crx- retina GCAGCTCACA GGGGCTGGGG (2) GGGGGAGGGG (4) GTGGGGTTGG 31.7 0.0317 P10.5 crx+ retina GCAGCTCACA GGGGCTGGGG (2) GGGGGAGGGG (4) GGGGGGGGGG GGGGGTGGGG (2) TTAGCTTCTG 40.3 0.0403 Adult retinal GCAGCTCACA GGGGCTGGGG (2) GGGGGAGGGG (4) GGGGGGGGGG TTAGCTTCTG 35.3 0.0353 ONL GCAGCTCACA GGGGAAGGGG GGGGGGGGGG GGGGGGTGGG (4) 13.4 0.0134