Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27061
0610011I04Rik
RIKEN cDNA 0610011I04 gene
6
66058
Gene Ontology
integral to membrane
Human Homolog
HCA112[hepatocellular carcinoma-associated antigen 112]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCCCTCCC
CTAAAAAAAC
GCCCTGCTGG (
4
)
9.7
0.0097
Cb medulloblastoma
AGCAGGGCTC
2.3
0.0023
P8 GC+1d culture
AAGCCCTCCC
AGCAGGGCTC
CTAAAAAAAC
GCCACTGCCT
GCCCTGCTGG (
4
)
GGCCTTTGCG
TTTGTTAAAC
(
2
)
14.7
0.0147
P8 GC+SHH+1d culture
AAGCCCTCCC
GCCACTGCCT
GCCCTGCTGG (
4
)
TTTGTTAAAC
(
2
)
11.6
0.0116
3T3 fibroblasts
GCCACTGCCT
7
0.007
E15 cortex
AGCAGGGCTC
4.9
0.0049
P1 cortex
AAGCCCTCCC
TGTGCCCTCC
9
0.009
Hypothalamus
AGCAGGGCTC
GCCACTGCCT
3.6
0.0036
E12.5 retina
AAGCCCTCCC
GCCACTGCCT
3.8
0.0038
E14.5 retina
TTTGTTAAAC
(
2
)
3.6
0.0036
E16.5 retina
AAGCCCTCCC
GCCACTGCCT
TTTGTTAAAC
(
2
)
18
0.018
E18.5 retina
GCCACTGCCT
TTTGTTAAAC
(
2
)
3.6
0.0036
P0.5 retina
GCCACTGCCT
2
0.002
P2.5 retina
CTAAAAAAAC
GCCCTGCTGG (
4
)
TTTGTTAAAC
(
2
)
8.9
0.0089
P4.5 retina
GCCACTGCCT
GCCCTGCTGG (
4
)
GGCCTTTGCG
TGTGCCCTCC
TTTGTTAAAC
(
2
)
19.8
0.0198
P6.5 retina
GCCACTGCCT
5
0.005
P10.5 crx- retina
GCCACTGCCT
GCCCTGCTGG (
4
)
TTTGTTAAAC
(
2
)
7.5
0.0075
P10.5 crx+ retina
GCCACTGCCT
TTTGTTAAAC
(
2
)
7.7
0.0077
Adult retinal
TGTGCCCTCC
1.9
0.0019
ONL
AAGCCCTCCC
GCCCTGCTGG (
4
)
5.7
0.0057
