| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCCTCATT (2) GGTGCAGTGC (3) TGTACCCCCA
| 19.6 | 0.0196 |
| Cb medulloblastoma | AAGCCTCATT (2) GGTGCAGTGC (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AAGCCTCATT (2) GGTGCAGTGC (3) TGTACCCCCA
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | AAGCCTCATT (2) CTGCTGCCCT (5) GGTGCAGTGC (3) TATCTCTGGA TGTACCCCCA
| 26.9 | 0.0269 |
| 3T3 fibroblasts | GGTGCAGTGC (3) TGTATCCCCA (4)
| 7 | 0.007 |
| E15 cortex | AAGCCTCATT (2) CTGCTGCCCT (5)
| 14.8 | 0.0148 |
| P1 cortex | AAGCCTCATT (2) CTGCTGCCCT (5)
| 27.2 | 0.0272 |
| Hypothalamus | AAGCCTCATT (2)
| 9.1 | 0.0091 |
| E12.5 retina | AAGCCTCATT (2) CTGCTGCCCT (5) GGTGCAGTGC (3) TGTACCCCCA
| 48.8 | 0.0488 |
| E14.5 retina | AAGCCTCATT (2) CTGCTGCCCT (5)
| 36.4 | 0.0364 |
| E16.5 retina | AAGCCTCATT (2) CTGCTGCCCT (5) GGTGCAGTGC (3)
| 19.9 | 0.0199 |
| E18.5 retina | AAGCCTCATT (2) TGTACCCCCA
| 20 | 0.02 |
| P0.5 retina | AAGCCTCATT (2) CTGCTGCCCT (5)
| 11.8 | 0.0118 |
| P2.5 retina | AAGCCTCATT (2) TATCTCTGGA TGTACCCCCA TGTATCCCCA (4)
| 38.8 | 0.0388 |
| P4.5 retina | AAGCCTCATT (2) CTGCTGCCCT (5) TATCTCTGGA TGTACCCCCA
| 17.9 | 0.0179 |
| P6.5 retina | AAGCCTCATT (2) TGTATCCCCA (4)
| 38.3 | 0.0383 |
| P10.5 crx- retina | AAGCCTCATT (2) CTGCTGCCCT (5) GGTGCAGTGC (3)
| 41 | 0.041 |
| P10.5 crx+ retina | AAGCCTCATT (2) GGTGCAGTGC (3) TGTACCCCCA
| 21.2 | 0.0212 |
| Adult retinal | AAGCCTCATT (2) CTGCTGCCCT (5) GGTGCAGTGC (3) TGTACCCCCA
| 16.8 | 0.0168 |
| ONL | AAGCCTCATT (2)
| 11.5 | 0.0115 |