Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271689	Tcirg1	T-cell, immune regulator 1	19	19 6.0 cM	27060
Gene Ontology	hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | integral to membrane | membrane | plasma membrane
Human Homolog	TCIRG1[T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) GGCAGGAAGT GGGCCAGGCT (2) TCTTCCCATA (2) 57 0.057 Cb medulloblastoma CCCTGCGGTT CCTTTAATCC (3) GGCAGGAAGT GGCCCGAGAG TCTTCCCATA (2) 53.1 0.0531 P8 GC+1d culture CCTTTAATCC (3) GGCAGGAAGT GGCCCGAGAG GGGCCAGGCT (2) TCTTCCCATA (2) 44.5 0.0445 P8 GC+SHH+1d culture CCTTTAATCC (3) GGCAGGAAGT 30.5 0.0305 3T3 fibroblasts CCCTGCGGTT CCCTGGGTTG CCTTTAATCC (3) GGCAGGAAGT GGCCCGAGAG 105.1 0.1051 E15 cortex CCTTTAATCC (3) TGCTGTGGAG (3) 59.3 0.0593 P1 cortex CCTTTAATCC (3) GGCCCGAGAG 159 0.159 Hypothalamus CCTTTAATCC (3) GGCAGGAAGT TGCTGTGGAG (3) 27.1 0.0271 E12.5 retina CCTTTAATCC (3) GGCAGGAAGT TCTTCCCATA (2) 82.6 0.0826 E14.5 retina CCTTTAATCC (3) GGCCCGAGAG TCTTCCCATA (2) 123.9 0.1239 E16.5 retina CCCTGCGGTT CCTTTAATCC (3) GGCAGGAAGT TCTTCCCATA (2) 77.8 0.0778 E18.5 retina CCTTTAATCC (3) GGCCCGAGAG 27.2 0.0272 P0.5 retina CCCTGCGGTT CCCTGGGTTG CCTTTAATCC (3) GGCCCGAGAG TCTTCCCATA (2) 86.4 0.0864 P2.5 retina CCTTTAATCC (3) GGCCCGAGAG TCTTCCCATA (2) TGCTGTGGAG (3) 75.8 0.0758 P4.5 retina CCTTTAATCC (3) GGCCCGAGAG TCTTCCCATA (2) 51.6 0.0516 P6.5 retina CCTTTAATCC (3) GGCCCGAGAG TCTTCCCATA (2) 75 0.075 P10.5 crx- retina CCTTTAATCC (3) GGCCCGAGAG GGGCCAGGCT (2) TCTTCCCATA (2) TGCTGTGGAG (3) 70.8 0.0708 P10.5 crx+ retina CCTTTAATCC (3) GGCCCGAGAG 44.2 0.0442 Adult retinal CCCTGGGTTG CCTTTAATCC (3) GGCAGGAAGT TCTTCCCATA (2) 138.9 0.1389 ONL CCTTTAATCC (3) TGCTGTGGAG (3) 86.2 0.0862