| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GTGGGCAGCC (3)
| 270.8 | 0.2708 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAAAAGA GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 1001.3 | 1.0013 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GGGCAGAATC
| 276.2 | 0.2762 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GGGCAGAATC GTGGGCAGCC (3)
| 380.6 | 0.3806 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGACTTTCCC (4) CTCTGGGGTT GTGGGCAGCC (3)
| 63 | 0.063 |
| E15 cortex | AAAAAAAAAA (2) GAAAAAAAAA (2) TGTGTTTTCC
| 272.1 | 0.2721 |
| P1 cortex | AAAAAAAAAA (2) GAAAAAAAAA (2) GAGAAAAAAA (2)
| 295.4 | 0.2954 |
| Hypothalamus | AAAAAAAAAA (2) GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 201.1 | 0.2011 |
| E12.5 retina | AAAAAAAAAA (2) AAAAAAAAGA GAAAAAAAAA (2) GTTCATATCA
| 189.6 | 0.1896 |
| E14.5 retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) TGTGTTTTCC
| 156.5 | 0.1565 |
| E16.5 retina | AAAAAAAAAA (2) AGACTTTCCC (4) CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 77.8 | 0.0778 |
| E18.5 retina | AAAAAAAAAA (2) CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GTTCATATCA
| 467.4 | 0.4674 |
| P0.5 retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GTGGGCAGCC (3)
| 178.7 | 0.1787 |
| P2.5 retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GTTCATATCA
| 464.6 | 0.4646 |
| P4.5 retina | AAAAAAAAAA (2) CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GGGCAGAATC TGTGTTTTCC
| 374.4 | 0.3744 |
| P6.5 retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2) GGGCAGAATC
| 320.2 | 0.3202 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGTT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 70.7 | 0.0707 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAAAAAAAGA CTCTGGGGTT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 159.5 | 0.1595 |
| Adult retinal | AAAAAAAAAA (2) ATTGGTTAAT (2) GAAAAAAAAA (2)
| 76 | 0.076 |
| ONL | AAAAAAAAAA (2) ATTGGTTAAT (2) CTCTGGGGCT GAAAAAAAAA (2) GAAAACAAAA GAGAAAAAAA (2)
| 137.8 | 0.1378 |