| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GAAGCCTGTC (2) GAGAATTTTA GGAGATTTTA (6) TTTTGTTTTT (2)
| 210.3 | 0.2103 |
| Cb medulloblastoma | AAAAAAAAAA (2) GAGAATTTTA GGAGATTTTA (6) TTTAGGACAA TTTTGTTTTT (2)
| 818.6 | 0.8186 |
| P8 GC+1d culture | AAAAAAAAAA (2) GAGAATTTTA GGAGATTTTA (6) TTTAGGACAA
| 215.7 | 0.2157 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GGAGATTTTA (6) TTTAGGACAA TTTTGTTTTT (2)
| 285.8 | 0.2858 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) GGAGATTTTA (6)
| 227.6 | 0.2276 |
| P1 cortex | AAAAAAAAAA (2) GGAGATTTTA (6) TTTTGTTTTT (2)
| 268.1 | 0.2681 |
| Hypothalamus | AAAAAAAAAA (2) GGAGATTTTA (6) TTTTGTTTTT (2)
| 126.8 | 0.1268 |
| E12.5 retina | AAAAAAAAAA (2) GAGAATTTTA
| 142.7 | 0.1427 |
| E14.5 retina | AAAAAAAAAA (2) GAGAATTTTA GGAGATTTTA (6) TTTTGTTTTT (2)
| 101.9 | 0.1019 |
| E16.5 retina | AAAAAAAAAA (2) GAGAATTTTA TTTTGTTTTT (2)
| 47.1 | 0.0471 |
| E18.5 retina | AAAAAAAAAA (2) GAGAATTTTA
| 378.3 | 0.3783 |
| P0.5 retina | AAAAAAAAAA (2)
| 117.8 | 0.1178 |
| P2.5 retina | AAAAAAAAAA (2) GAGAATTTTA
| 330.9 | 0.3309 |
| P4.5 retina | AAAAAAAAAA (2) GAGAATTTTA TTTTGTTTTT (2)
| 293.2 | 0.2932 |
| P6.5 retina | AAAAAAAAAA (2) GAGAATTTTA
| 268.5 | 0.2685 |
| P10.5 crx- retina | AAAAAAAAAA (2) GAAGCCTGTC (2)
| 46.5 | 0.0465 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GAGAATTTTA TTTAGGACAA TTTTGTTTTT (2)
| 101.8 | 0.1018 |
| Adult retinal | AAAAAAAAAA (2) GAGAATTTTA
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) GAAGCCTGTC (2) GAGAATTTTA TTTAGGACAA
| 109.1 | 0.1091 |