Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271854	Lrp1	low density lipoprotein receptor-related protein 1	10		16971
Gene Ontology	calcium ion binding | cell proliferation | coated pit | endocytosis | extracellular space | integral to membrane | integral to plasma membrane | lipid metabolism | lipid transporter activity | lipoprotein binding | membrane | membrane fraction | pathogenesis | receptor activity
Human Homolog	LRP1[low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTCCCTT GGAGGTGGAG (2) 9.8 0.0098 Cb medulloblastoma GGGGGCCACG 2.3 0.0023 P8 GC+1d culture CCCTTCCCTT CTCAGTATCC (2) GCCATCTGAG (4) GGAGGTGGAG (2) 54.7 0.0547 P8 GC+SHH+1d culture CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) 34 0.034 3T3 fibroblasts CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) 35 0.035 E15 cortex CCCTTCCCTT GGAGGTGGAG (2) 39.5 0.0395 P1 cortex CCCTTCCCTT CTCAGTATCC (2) 22.7 0.0227 Hypothalamus CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) GGGGGCCACG 16.2 0.0162 E12.5 retina CCCTTCCCTT 16.9 0.0169 E14.5 retina CCCTTCCCTT GGAGGTGGAG (2) 12.7 0.0127 E16.5 retina CCCTTCCCTT GCCATCTGAG (4) GGAGGTGGAG (2) 48.9 0.0489 E18.5 retina CCCTTCCCTT GCCATCTGAG (4) GGAGGTGGAG (2) 16.3 0.0163 P0.5 retina CCCTTCCCTT GGAGGTGGAG (2) 43.2 0.0432 P2.5 retina CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) GGGGGCCACG 24.7 0.0247 P4.5 retina CCCTTCCCTT CTCAGTATCC (2) GCCATCTGAG (4) GGAGGTGGAG (2) 15.8 0.0158 P6.5 retina CCCTTCCCTT CTCAGTATCC (2) GCCATCTGAG (4) GGAGGTGGAG (2) 21.7 0.0217 P10.5 crx- retina CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) 13 0.013 P10.5 crx+ retina CCCTTCCCTT CTCAGTATCC (2) GGAGGTGGAG (2) 11.5 0.0115 Adult retinal CCCTTCCCTT GCCATCTGAG (4) GGAGGTGGAG (2) 9.4 0.0094 ONL CTCAGTATCC (2) GCCATCTGAG (4) GGAGGTGGAG (2) 7.6 0.0076