| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GGGGGAGGGT
| 207.2 | 0.2072 |
| Cb medulloblastoma | AAAAAAAAAA (2) GGGGGAGGGT
| 804.7 | 0.8047 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAGGGTTTAT (2) GGGGGAGGGT
| 208.9 | 0.2089 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GGGGGAGGGT
| 279.9 | 0.2799 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) AAGGGTTTAT (2)
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) AAGGGTTTAT (2)
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2) AAGGGTTTAT (2) GCAGAGTGGC GGGGGAGGGT
| 132.2 | 0.1322 |
| E12.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GCAGAGTGGC
| 146.4 | 0.1464 |
| E14.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GCCCCAGAGA GGCTCTGGTG (2) GGGGGAGGGT
| 107.4 | 0.1074 |
| E16.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GCCCCAGAGA GGCTCTGGTG (2) GGGGGAGGGT
| 58 | 0.058 |
| E18.5 retina | AAAAAAAAAA (2)
| 374.7 | 0.3747 |
| P0.5 retina | AAAAAAAAAA (2)
| 117.8 | 0.1178 |
| P2.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2)
| 330.9 | 0.3309 |
| P4.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2)
| 285.3 | 0.2853 |
| P6.5 retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GCAGAGTGGC
| 275.2 | 0.2752 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GCAGAGTGGC GGGGGAGGGT
| 59.5 | 0.0595 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAGGGTTTAT (2) GGGGGAGGGT
| 99.9 | 0.0999 |
| Adult retinal | AAAAAAAAAA (2) GGGGGAGGGT
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) GCCCCAGAGA GGCTCTGGTG (2)
| 107.2 | 0.1072 |