Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.272430
1110059E24Rik
RIKEN cDNA 1110059E24 gene
19
66206
Mm.272430
5730446C15Rik
RIKEN cDNA 5730446C15 gene
19
226016
Mm.272430
9030607L02Rik
RIKEN cDNA 9030607L02 gene
19
75754
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACATATGTG
(
3
)
1.6
0.0016
Cb medulloblastoma
TTCATATTTT (
2
)
16.2
0.0162
P8 GC+1d culture
TACATATGTG
(
3
)
TTCATATTTT (
2
)
2.2
0.0022
P8 GC+SHH+1d culture
TGAGACTAAC
(
3
)
TTCATATTTT (
2
)
5.8
0.0058
Hypothalamus
TACATATGTG
(
3
)
TGTAATGATT
3.6
0.0036
E12.5 retina
TGCCTGTGAA
(
3
)
1.9
0.0019
E14.5 retina
TACATATGTG
(
3
)
3.6
0.0036
E16.5 retina
TGTAATGATT
1.8
0.0018
E18.5 retina
TACATATGTG
(
3
)
TTCATATTTT (
2
)
3.6
0.0036
P0.5 retina
TGCCTGTGAA
(
3
)
2
0.002
P2.5 retina
TGCCTGTGAA
(
3
)
TGTAATGATT
TTCATATTTT (
2
)
8.9
0.0089
P4.5 retina
TACATATGTG
(
3
)
TGTAATGATT
TTCATATTTT (
2
)
17.9
0.0179
P6.5 retina
TACATATGTG
(
3
)
TGTAATGATT
10
0.01
P10.5 crx- retina
TTCATATTTT (
2
)
1.9
0.0019
P10.5 crx+ retina
TGCCTGTGAA
(
3
)
TGTAATGATT
5.7
0.0057
ONL
TGAGACTAAC
(
3
)
TGTAATGATT
3.8
0.0038
